Gene : Sobic.007G166500 S. bicolor v3.1.1
Defline:  (1 of 76) PF01357//PF03330 - Pollen allergen (Pollen_allerg_1) // Rare lipoprotein A (RlpA)-like double-psi beta-barrel (DPBB_1) Genomic Order:  1751
Name:  ? Sobic.007G166500 Secondary Identifier:  ? PAC:37937023
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0 Pathways

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.007G166500 0.5kb upstream 0.5kb upstream 1364 true Chr07: 60162542-60163905 Sorghum bicolor
Sobic.007G166500 0.5kb upstream 0.5kb upstream 500 false Chr07: 60162542-60163041 Sorghum bicolor
Sobic.007G166500 0.5kb downstream 0.5kb downstream 1364 true Chr07: 60163042-60164405 Sorghum bicolor
Sobic.007G166500 0.5kb downstream 0.5kb downstream 500 false Chr07: 60163906-60164405 Sorghum bicolor
Sobic.007G166500 1.0kb upstream 1.0kb upstream 1864 true Chr07: 60162042-60163905 Sorghum bicolor
Sobic.007G166500 1.0kb upstream 1.0kb upstream 1000 false Chr07: 60162042-60163041 Sorghum bicolor
Sobic.007G166500 1.0kb downstream 1.0kb downstream 1864 true Chr07: 60163042-60164905 Sorghum bicolor
Sobic.007G166500 1.0kb downstream 1.0kb downstream 1000 false Chr07: 60163906-60164905 Sorghum bicolor
Sobic.007G166500 2.0kb upstream 2.0kb upstream 2864 true Chr07: 60161042-60163905 Sorghum bicolor
Sobic.007G166500 2.0kb upstream 2.0kb upstream 2000 false Chr07: 60161042-60163041 Sorghum bicolor
Sobic.007G166500 2.0kb downstream 2.0kb downstream 2864 true Chr07: 60163042-60165905 Sorghum bicolor
Sobic.007G166500 2.0kb downstream 2.0kb downstream 2000 false Chr07: 60163906-60165905 Sorghum bicolor
Sobic.007G166500 5.0kb upstream 5.0kb upstream 5864 true Chr07: 60158042-60163905 Sorghum bicolor
Sobic.007G166500 5.0kb upstream 5.0kb upstream 5000 false Chr07: 60158042-60163041 Sorghum bicolor
Sobic.007G166500 5.0kb downstream 5.0kb downstream 5864 true Chr07: 60163042-60168905 Sorghum bicolor
Sobic.007G166500 5.0kb downstream 5.0kb downstream 5000 false Chr07: 60163906-60168905 Sorghum bicolor
Sobic.007G166500 10.0kb upstream 10.0kb upstream 10864 true Chr07: 60153042-60163905 Sorghum bicolor
Sobic.007G166500 10.0kb upstream 10.0kb upstream 10000 false Chr07: 60153042-60163041 Sorghum bicolor
Sobic.007G166500 10.0kb downstream 10.0kb downstream 10864 true Chr07: 60163042-60173905 Sorghum bicolor
Sobic.007G166500 10.0kb downstream 10.0kb downstream 10000 false Chr07: 60163906-60173905 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027787 5273 Angiosperm View MSA
122189496 5267 Panicoideae View MSA
124576310 5269 Grass View MSA
123429074 5275 Viridiplantae View MSA
121297395 5274 Embryophyte View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.647        
cufflinks 0.088        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.157        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 14.032     High High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.081        

0 Strain