Gene : Sobic.007G163700 S. bicolor v3.1.1
Defline:  (1 of 1) K14821 - bud site selection protein 20 (BUD20) Genomic Order:  1722
Name:  ? Sobic.007G163700 Secondary Identifier:  ? PAC:37936023
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.007G163700 0.5kb upstream 0.5kb upstream 4419 true Chr07: 59808966-59813384 Sorghum bicolor
Sobic.007G163700 0.5kb upstream 0.5kb upstream 500 false Chr07: 59808966-59809465 Sorghum bicolor
Sobic.007G163700 0.5kb downstream 0.5kb downstream 4419 true Chr07: 59809466-59813884 Sorghum bicolor
Sobic.007G163700 0.5kb downstream 0.5kb downstream 500 false Chr07: 59813385-59813884 Sorghum bicolor
Sobic.007G163700 1.0kb upstream 1.0kb upstream 4919 true Chr07: 59808466-59813384 Sorghum bicolor
Sobic.007G163700 1.0kb upstream 1.0kb upstream 1000 false Chr07: 59808466-59809465 Sorghum bicolor
Sobic.007G163700 1.0kb downstream 1.0kb downstream 4919 true Chr07: 59809466-59814384 Sorghum bicolor
Sobic.007G163700 1.0kb downstream 1.0kb downstream 1000 false Chr07: 59813385-59814384 Sorghum bicolor
Sobic.007G163700 2.0kb upstream 2.0kb upstream 5919 true Chr07: 59807466-59813384 Sorghum bicolor
Sobic.007G163700 2.0kb upstream 2.0kb upstream 2000 false Chr07: 59807466-59809465 Sorghum bicolor
Sobic.007G163700 2.0kb downstream 2.0kb downstream 5919 true Chr07: 59809466-59815384 Sorghum bicolor
Sobic.007G163700 2.0kb downstream 2.0kb downstream 2000 false Chr07: 59813385-59815384 Sorghum bicolor
Sobic.007G163700 5.0kb upstream 5.0kb upstream 8919 true Chr07: 59804466-59813384 Sorghum bicolor
Sobic.007G163700 5.0kb upstream 5.0kb upstream 5000 false Chr07: 59804466-59809465 Sorghum bicolor
Sobic.007G163700 5.0kb downstream 5.0kb downstream 8919 true Chr07: 59809466-59818384 Sorghum bicolor
Sobic.007G163700 5.0kb downstream 5.0kb downstream 5000 false Chr07: 59813385-59818384 Sorghum bicolor
Sobic.007G163700 10.0kb upstream 10.0kb upstream 13919 true Chr07: 59799466-59813384 Sorghum bicolor
Sobic.007G163700 10.0kb upstream 10.0kb upstream 10000 false Chr07: 59799466-59809465 Sorghum bicolor
Sobic.007G163700 10.0kb downstream 10.0kb downstream 13919 true Chr07: 59809466-59823384 Sorghum bicolor
Sobic.007G163700 10.0kb downstream 10.0kb downstream 10000 false Chr07: 59813385-59823384 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122195253 5267 Panicoideae View MSA
124570755 5269 Grass View MSA
122041921 5273 Angiosperm View MSA
123428955 5275 Viridiplantae View MSA
121346205 5274 Embryophyte View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 36.557     High High
cufflinks 2.278       Low
cufflinks 7.631        
cufflinks 15.648     High  
cufflinks 18.656     High  
cufflinks 20.251     High High
cufflinks 11.746     High  
cufflinks 2.888       Low
cufflinks 13.03     High  
cufflinks 12.155     High  
cufflinks 9.602        
cufflinks 9.516        
cufflinks 10.783        
cufflinks 9.124        
cufflinks 9.549        
cufflinks 6.616        
cufflinks 11.949     High  
cufflinks 11.743     High  
cufflinks 7.151        
cufflinks 13.682     High  
cufflinks 23.604     High High
cufflinks 12.529     High  
cufflinks 9.665        
cufflinks 8.901        
cufflinks 3.878       Low
cufflinks 1.676       Low
cufflinks 9.78        
cufflinks 28.519     High High
cufflinks 9.689        
cufflinks 12.478     High  

0 Strain