Gene : Sobic.007G162300 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR10168//PTHR10168:SF14 - GLUTAREDOXIN // GLUTAREDOXIN-C5, CHLOROPLASTIC-RELATED Genomic Order:  1706
Name:  ? Sobic.007G162300 Secondary Identifier:  ? PAC:37936022
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor THIOREDOX-PWY Sorghum bicolor pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.007G162300 0.5kb upstream 0.5kb upstream 3226 true Chr07: 59647432-59650657 Sorghum bicolor
Sobic.007G162300 0.5kb upstream 0.5kb upstream 500 false Chr07: 59650158-59650657 Sorghum bicolor
Sobic.007G162300 0.5kb downstream 0.5kb downstream 3226 true Chr07: 59646932-59650157 Sorghum bicolor
Sobic.007G162300 0.5kb downstream 0.5kb downstream 500 false Chr07: 59646932-59647431 Sorghum bicolor
Sobic.007G162300 1.0kb upstream 1.0kb upstream 3726 true Chr07: 59647432-59651157 Sorghum bicolor
Sobic.007G162300 1.0kb upstream 1.0kb upstream 1000 false Chr07: 59650158-59651157 Sorghum bicolor
Sobic.007G162300 1.0kb downstream 1.0kb downstream 3726 true Chr07: 59646432-59650157 Sorghum bicolor
Sobic.007G162300 1.0kb downstream 1.0kb downstream 1000 false Chr07: 59646432-59647431 Sorghum bicolor
Sobic.007G162300 2.0kb upstream 2.0kb upstream 4726 true Chr07: 59647432-59652157 Sorghum bicolor
Sobic.007G162300 2.0kb upstream 2.0kb upstream 2000 false Chr07: 59650158-59652157 Sorghum bicolor
Sobic.007G162300 2.0kb downstream 2.0kb downstream 4726 true Chr07: 59645432-59650157 Sorghum bicolor
Sobic.007G162300 2.0kb downstream 2.0kb downstream 2000 false Chr07: 59645432-59647431 Sorghum bicolor
Sobic.007G162300 5.0kb upstream 5.0kb upstream 7726 true Chr07: 59647432-59655157 Sorghum bicolor
Sobic.007G162300 5.0kb upstream 5.0kb upstream 5000 false Chr07: 59650158-59655157 Sorghum bicolor
Sobic.007G162300 5.0kb downstream 5.0kb downstream 7726 true Chr07: 59642432-59650157 Sorghum bicolor
Sobic.007G162300 5.0kb downstream 5.0kb downstream 5000 false Chr07: 59642432-59647431 Sorghum bicolor
Sobic.007G162300 10.0kb upstream 10.0kb upstream 12726 true Chr07: 59647432-59660157 Sorghum bicolor
Sobic.007G162300 10.0kb upstream 10.0kb upstream 10000 false Chr07: 59650158-59660157 Sorghum bicolor
Sobic.007G162300 10.0kb downstream 10.0kb downstream 12726 true Chr07: 59637432-59650157 Sorghum bicolor
Sobic.007G162300 10.0kb downstream 10.0kb downstream 10000 false Chr07: 59637432-59647431 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026565 5273 Angiosperm View MSA
122189726 5267 Panicoideae View MSA
124576757 5269 Grass View MSA
121350843 5274 Embryophyte View MSA
123428660 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.584       High
cufflinks 3.835        
cufflinks 2.846        
cufflinks 4.183        
cufflinks 3.52        
cufflinks 2.8        
cufflinks 5.626       High
cufflinks 8.528       High
cufflinks 2.47       Low
cufflinks 2.168       Low
cufflinks 3.643        
cufflinks 3.524        
cufflinks 2.171       Low
cufflinks 4.174        
cufflinks 2.776        
cufflinks 2.94        
cufflinks 5.165        
cufflinks 5.667       High
cufflinks 2.433       Low
cufflinks 5.543       High
cufflinks 2.981        
cufflinks 7.056       High
cufflinks 3.623        
cufflinks 3.69        
cufflinks 2.828        
cufflinks 3.754        
cufflinks 2.854        
cufflinks 3.003        
cufflinks 6.538       High
cufflinks 3.506        

0 Strain