Gene : Sobic.007G161800 S. bicolor v3.1.1
Defline:  (1 of 2) 2.7.1.3 - Ketohexokinase / Hepatic fructokinase Genomic Order:  1701
Name:  ? Sobic.007G161800 Secondary Identifier:  ? PAC:37934638
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor PWY66-373 Sorghum bicolor pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.007G161800 0.5kb upstream 0.5kb upstream 4279 true Chr07: 59615098-59619376 Sorghum bicolor
Sobic.007G161800 0.5kb upstream 0.5kb upstream 500 false Chr07: 59618877-59619376 Sorghum bicolor
Sobic.007G161800 0.5kb downstream 0.5kb downstream 4279 true Chr07: 59614598-59618876 Sorghum bicolor
Sobic.007G161800 0.5kb downstream 0.5kb downstream 500 false Chr07: 59614598-59615097 Sorghum bicolor
Sobic.007G161800 1.0kb upstream 1.0kb upstream 4779 true Chr07: 59615098-59619876 Sorghum bicolor
Sobic.007G161800 1.0kb upstream 1.0kb upstream 1000 false Chr07: 59618877-59619876 Sorghum bicolor
Sobic.007G161800 1.0kb downstream 1.0kb downstream 4779 true Chr07: 59614098-59618876 Sorghum bicolor
Sobic.007G161800 1.0kb downstream 1.0kb downstream 1000 false Chr07: 59614098-59615097 Sorghum bicolor
Sobic.007G161800 2.0kb upstream 2.0kb upstream 5779 true Chr07: 59615098-59620876 Sorghum bicolor
Sobic.007G161800 2.0kb upstream 2.0kb upstream 2000 false Chr07: 59618877-59620876 Sorghum bicolor
Sobic.007G161800 2.0kb downstream 2.0kb downstream 5779 true Chr07: 59613098-59618876 Sorghum bicolor
Sobic.007G161800 2.0kb downstream 2.0kb downstream 2000 false Chr07: 59613098-59615097 Sorghum bicolor
Sobic.007G161800 5.0kb upstream 5.0kb upstream 8779 true Chr07: 59615098-59623876 Sorghum bicolor
Sobic.007G161800 5.0kb upstream 5.0kb upstream 5000 false Chr07: 59618877-59623876 Sorghum bicolor
Sobic.007G161800 5.0kb downstream 5.0kb downstream 8779 true Chr07: 59610098-59618876 Sorghum bicolor
Sobic.007G161800 5.0kb downstream 5.0kb downstream 5000 false Chr07: 59610098-59615097 Sorghum bicolor
Sobic.007G161800 10.0kb upstream 10.0kb upstream 13779 true Chr07: 59615098-59628876 Sorghum bicolor
Sobic.007G161800 10.0kb upstream 10.0kb upstream 10000 false Chr07: 59618877-59628876 Sorghum bicolor
Sobic.007G161800 10.0kb downstream 10.0kb downstream 13779 true Chr07: 59605098-59618876 Sorghum bicolor
Sobic.007G161800 10.0kb downstream 10.0kb downstream 10000 false Chr07: 59605098-59615097 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122190109 5267 Panicoideae View MSA
124570454 5269 Grass View MSA
122044169 5273 Angiosperm View MSA
121347285 5274 Embryophyte View MSA
123428634 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.241       Low
cufflinks 2.862       Low
cufflinks 6.367        
cufflinks 11.623       High
cufflinks 10.227        
cufflinks 18.007     High High
cufflinks 7.929        
cufflinks 6.803        
cufflinks 12.944     High High
cufflinks 15.259     High High
cufflinks 7.582        
cufflinks 9.518        
cufflinks 8.501        
cufflinks 7.491        
cufflinks 5.941        
cufflinks 6.504        
cufflinks 7.146        
cufflinks 7.584        
cufflinks 7.461        
cufflinks 7.186        
cufflinks 12.719       High
cufflinks 6.89        
cufflinks 5.647        
cufflinks 5.474        
cufflinks 3.083       Low
cufflinks 3.238       Low
cufflinks 11.471     High  
cufflinks 4.634       Low
cufflinks 12.777     High High
cufflinks 7.95        

0 Strain