Gene : Sobic.007G159800 S. bicolor v3.1.1
Defline:  (1 of 26) PF03479 - Domain of unknown function (DUF296) (DUF296) Genomic Order:  1682
Name:  ? Sobic.007G159800 Secondary Identifier:  ? PAC:37936769
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.007G159800 0.5kb upstream 0.5kb upstream 7112 true Chr07: 59410962-59418073 Sorghum bicolor
Sobic.007G159800 0.5kb upstream 0.5kb upstream 500 false Chr07: 59417574-59418073 Sorghum bicolor
Sobic.007G159800 0.5kb downstream 0.5kb downstream 7112 true Chr07: 59410462-59417573 Sorghum bicolor
Sobic.007G159800 0.5kb downstream 0.5kb downstream 500 false Chr07: 59410462-59410961 Sorghum bicolor
Sobic.007G159800 1.0kb upstream 1.0kb upstream 7612 true Chr07: 59410962-59418573 Sorghum bicolor
Sobic.007G159800 1.0kb upstream 1.0kb upstream 1000 false Chr07: 59417574-59418573 Sorghum bicolor
Sobic.007G159800 1.0kb downstream 1.0kb downstream 7612 true Chr07: 59409962-59417573 Sorghum bicolor
Sobic.007G159800 1.0kb downstream 1.0kb downstream 1000 false Chr07: 59409962-59410961 Sorghum bicolor
Sobic.007G159800 2.0kb upstream 2.0kb upstream 8612 true Chr07: 59410962-59419573 Sorghum bicolor
Sobic.007G159800 2.0kb upstream 2.0kb upstream 2000 false Chr07: 59417574-59419573 Sorghum bicolor
Sobic.007G159800 2.0kb downstream 2.0kb downstream 8612 true Chr07: 59408962-59417573 Sorghum bicolor
Sobic.007G159800 2.0kb downstream 2.0kb downstream 2000 false Chr07: 59408962-59410961 Sorghum bicolor
Sobic.007G159800 5.0kb upstream 5.0kb upstream 11612 true Chr07: 59410962-59422573 Sorghum bicolor
Sobic.007G159800 5.0kb upstream 5.0kb upstream 5000 false Chr07: 59417574-59422573 Sorghum bicolor
Sobic.007G159800 5.0kb downstream 5.0kb downstream 11612 true Chr07: 59405962-59417573 Sorghum bicolor
Sobic.007G159800 5.0kb downstream 5.0kb downstream 5000 false Chr07: 59405962-59410961 Sorghum bicolor
Sobic.007G159800 10.0kb upstream 10.0kb upstream 16612 true Chr07: 59410962-59427573 Sorghum bicolor
Sobic.007G159800 10.0kb upstream 10.0kb upstream 10000 false Chr07: 59417574-59427573 Sorghum bicolor
Sobic.007G159800 10.0kb downstream 10.0kb downstream 16612 true Chr07: 59400962-59417573 Sorghum bicolor
Sobic.007G159800 10.0kb downstream 10.0kb downstream 10000 false Chr07: 59400962-59410961 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122185775 5267 Panicoideae View MSA
124581161 5269 Grass View MSA
122046470 5273 Angiosperm View MSA
121310610 5274 Embryophyte View MSA
123348051 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.68       High
cufflinks 0.041        
cufflinks 0.011     Low Low
cufflinks 0.011     Low Low
cufflinks 1.084       High
cufflinks 0.045     Low  
cufflinks 0.063     Low  
cufflinks 0.3        
cufflinks 0.097        
cufflinks 0.117        
cufflinks 0.002     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.135        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.094     Low  
cufflinks 0.152        
cufflinks 0.044     Low  
cufflinks 0.031     Low  
cufflinks 0.049     Low  
cufflinks 0.032     Low  
cufflinks 0.147        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.845       High
cufflinks 0.765       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.246        
cufflinks 0.139        
cufflinks 0.073     Low  

0 Strain