Gene : Sobic.007G216600 S. bicolor v3.1.1
Defline:  (1 of 2) PTHR13832//PTHR13832:SF286 - PROTEIN PHOSPHATASE 2C // PROTEIN PHOSPHATASE 2C 33-RELATED Genomic Order:  2256
Name:  ? Sobic.007G216600 Secondary Identifier:  ? PAC:37936004
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.007G216600 0.5kb upstream 0.5kb upstream 5266 true Chr07: 64491185-64496450 Sorghum bicolor
Sobic.007G216600 0.5kb upstream 0.5kb upstream 500 false Chr07: 64491185-64491684 Sorghum bicolor
Sobic.007G216600 0.5kb downstream 0.5kb downstream 5266 true Chr07: 64491685-64496950 Sorghum bicolor
Sobic.007G216600 0.5kb downstream 0.5kb downstream 500 false Chr07: 64496451-64496950 Sorghum bicolor
Sobic.007G216600 1.0kb upstream 1.0kb upstream 5766 true Chr07: 64490685-64496450 Sorghum bicolor
Sobic.007G216600 1.0kb upstream 1.0kb upstream 1000 false Chr07: 64490685-64491684 Sorghum bicolor
Sobic.007G216600 1.0kb downstream 1.0kb downstream 5766 true Chr07: 64491685-64497450 Sorghum bicolor
Sobic.007G216600 1.0kb downstream 1.0kb downstream 1000 false Chr07: 64496451-64497450 Sorghum bicolor
Sobic.007G216600 2.0kb upstream 2.0kb upstream 6766 true Chr07: 64489685-64496450 Sorghum bicolor
Sobic.007G216600 2.0kb upstream 2.0kb upstream 2000 false Chr07: 64489685-64491684 Sorghum bicolor
Sobic.007G216600 2.0kb downstream 2.0kb downstream 6766 true Chr07: 64491685-64498450 Sorghum bicolor
Sobic.007G216600 2.0kb downstream 2.0kb downstream 2000 false Chr07: 64496451-64498450 Sorghum bicolor
Sobic.007G216600 5.0kb upstream 5.0kb upstream 9766 true Chr07: 64486685-64496450 Sorghum bicolor
Sobic.007G216600 5.0kb upstream 5.0kb upstream 5000 false Chr07: 64486685-64491684 Sorghum bicolor
Sobic.007G216600 5.0kb downstream 5.0kb downstream 9766 true Chr07: 64491685-64501450 Sorghum bicolor
Sobic.007G216600 5.0kb downstream 5.0kb downstream 5000 false Chr07: 64496451-64501450 Sorghum bicolor
Sobic.007G216600 10.0kb upstream 10.0kb upstream 14766 true Chr07: 64481685-64496450 Sorghum bicolor
Sobic.007G216600 10.0kb upstream 10.0kb upstream 10000 false Chr07: 64481685-64491684 Sorghum bicolor
Sobic.007G216600 10.0kb downstream 10.0kb downstream 14766 true Chr07: 64491685-64506450 Sorghum bicolor
Sobic.007G216600 10.0kb downstream 10.0kb downstream 10000 false Chr07: 64496451-64506450 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122188178 5267 Panicoideae View MSA
124578966 5269 Grass View MSA
122043983 5273 Angiosperm View MSA
121350683 5274 Embryophyte View MSA
123426661 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.578        
cufflinks 0.75       Low
cufflinks 1.002       Low
cufflinks 1.661        
cufflinks 2.683        
cufflinks 1.813        
cufflinks 3.665        
cufflinks 1.85        
cufflinks 2.183        
cufflinks 2.814        
cufflinks 4.506        
cufflinks 5.681       High
cufflinks 2.378        
cufflinks 5.397       High
cufflinks 3.708        
cufflinks 1.209       Low
cufflinks 4.108        
cufflinks 4.128        
cufflinks 1.123       Low
cufflinks 3.559        
cufflinks 4.491        
cufflinks 5.187       High
cufflinks 5.13       High
cufflinks 5.148       High
cufflinks 0.98       Low
cufflinks 0.645       Low
cufflinks 2.95        
cufflinks 0.628       Low
cufflinks 3.689        
cufflinks 2.831        

0 Strain