Gene : Sobic.007G217100 S. bicolor v3.1.1
Defline:  (1 of 1) K14767 - U3 small nucleolar RNA-associated protein 3 (UTP3, SAS10) Genomic Order:  2261
Name:  ? Sobic.007G217100 Secondary Identifier:  ? PAC:37936068
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.007G217100 0.5kb upstream 0.5kb upstream 8595 true Chr07: 64545736-64554330 Sorghum bicolor
Sobic.007G217100 0.5kb upstream 0.5kb upstream 500 false Chr07: 64545736-64546235 Sorghum bicolor
Sobic.007G217100 0.5kb downstream 0.5kb downstream 8595 true Chr07: 64546236-64554830 Sorghum bicolor
Sobic.007G217100 0.5kb downstream 0.5kb downstream 500 false Chr07: 64554331-64554830 Sorghum bicolor
Sobic.007G217100 1.0kb upstream 1.0kb upstream 9095 true Chr07: 64545236-64554330 Sorghum bicolor
Sobic.007G217100 1.0kb upstream 1.0kb upstream 1000 false Chr07: 64545236-64546235 Sorghum bicolor
Sobic.007G217100 1.0kb downstream 1.0kb downstream 9095 true Chr07: 64546236-64555330 Sorghum bicolor
Sobic.007G217100 1.0kb downstream 1.0kb downstream 1000 false Chr07: 64554331-64555330 Sorghum bicolor
Sobic.007G217100 2.0kb upstream 2.0kb upstream 10095 true Chr07: 64544236-64554330 Sorghum bicolor
Sobic.007G217100 2.0kb upstream 2.0kb upstream 2000 false Chr07: 64544236-64546235 Sorghum bicolor
Sobic.007G217100 2.0kb downstream 2.0kb downstream 10095 true Chr07: 64546236-64556330 Sorghum bicolor
Sobic.007G217100 2.0kb downstream 2.0kb downstream 2000 false Chr07: 64554331-64556330 Sorghum bicolor
Sobic.007G217100 5.0kb upstream 5.0kb upstream 13095 true Chr07: 64541236-64554330 Sorghum bicolor
Sobic.007G217100 5.0kb upstream 5.0kb upstream 5000 false Chr07: 64541236-64546235 Sorghum bicolor
Sobic.007G217100 5.0kb downstream 5.0kb downstream 13095 true Chr07: 64546236-64559330 Sorghum bicolor
Sobic.007G217100 5.0kb downstream 5.0kb downstream 5000 false Chr07: 64554331-64559330 Sorghum bicolor
Sobic.007G217100 10.0kb upstream 10.0kb upstream 18095 true Chr07: 64536236-64554330 Sorghum bicolor
Sobic.007G217100 10.0kb upstream 10.0kb upstream 10000 false Chr07: 64536236-64546235 Sorghum bicolor
Sobic.007G217100 10.0kb downstream 10.0kb downstream 18095 true Chr07: 64546236-64564330 Sorghum bicolor
Sobic.007G217100 10.0kb downstream 10.0kb downstream 10000 false Chr07: 64554331-64564330 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027842 5273 Angiosperm View MSA
122180248 5267 Panicoideae View MSA
124576572 5269 Grass View MSA
121344490 5274 Embryophyte View MSA
123424280 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.623        
cufflinks 0.208       Low
cufflinks 0.723        
cufflinks 1.792        
cufflinks 3.468        
cufflinks 1.415        
cufflinks 1.671        
cufflinks 0.23       Low
cufflinks 2.685        
cufflinks 2.816        
cufflinks 2.896        
cufflinks 2.799        
cufflinks 1.742        
cufflinks 2.583        
cufflinks 2.058        
cufflinks 0.464       Low
cufflinks 1.915        
cufflinks 2.195        
cufflinks 0.615       Low
cufflinks 1.561        
cufflinks 5.493       High
cufflinks 3.383        
cufflinks 3.529        
cufflinks 3.506        
cufflinks 0.377       Low
cufflinks 0.149       Low
cufflinks 2.365        
cufflinks 4.102        
cufflinks 1.283        
cufflinks 3.697        

0 Strain