Gene : Sobic.007G213700 S. bicolor v3.1.1
Defline:  (1 of 1) 2.6.1.44//2.6.1.45//2.6.1.51 - Alanine--glyoxylate transaminase / Alanine--glyoxylate aminotransferase // Serine--glyoxylate transaminase / SGAT // Serine--pyruvate transaminase / Serine--pyruvate aminotransferase Genomic Order:  2228
Name:  ? Sobic.007G213700 Secondary Identifier:  ? PAC:37935146
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor GLYSYN-ALA-PWY Sorghum bicolor pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.007G213700 0.5kb upstream 0.5kb upstream 4212 true Chr07: 64253199-64257410 Sorghum bicolor
Sobic.007G213700 0.5kb upstream 0.5kb upstream 500 false Chr07: 64253199-64253698 Sorghum bicolor
Sobic.007G213700 0.5kb downstream 0.5kb downstream 4212 true Chr07: 64253699-64257910 Sorghum bicolor
Sobic.007G213700 0.5kb downstream 0.5kb downstream 500 false Chr07: 64257411-64257910 Sorghum bicolor
Sobic.007G213700 1.0kb upstream 1.0kb upstream 4712 true Chr07: 64252699-64257410 Sorghum bicolor
Sobic.007G213700 1.0kb upstream 1.0kb upstream 1000 false Chr07: 64252699-64253698 Sorghum bicolor
Sobic.007G213700 1.0kb downstream 1.0kb downstream 4712 true Chr07: 64253699-64258410 Sorghum bicolor
Sobic.007G213700 1.0kb downstream 1.0kb downstream 1000 false Chr07: 64257411-64258410 Sorghum bicolor
Sobic.007G213700 2.0kb upstream 2.0kb upstream 5712 true Chr07: 64251699-64257410 Sorghum bicolor
Sobic.007G213700 2.0kb upstream 2.0kb upstream 2000 false Chr07: 64251699-64253698 Sorghum bicolor
Sobic.007G213700 2.0kb downstream 2.0kb downstream 5712 true Chr07: 64253699-64259410 Sorghum bicolor
Sobic.007G213700 2.0kb downstream 2.0kb downstream 2000 false Chr07: 64257411-64259410 Sorghum bicolor
Sobic.007G213700 5.0kb upstream 5.0kb upstream 8712 true Chr07: 64248699-64257410 Sorghum bicolor
Sobic.007G213700 5.0kb upstream 5.0kb upstream 5000 false Chr07: 64248699-64253698 Sorghum bicolor
Sobic.007G213700 5.0kb downstream 5.0kb downstream 8712 true Chr07: 64253699-64262410 Sorghum bicolor
Sobic.007G213700 5.0kb downstream 5.0kb downstream 5000 false Chr07: 64257411-64262410 Sorghum bicolor
Sobic.007G213700 10.0kb upstream 10.0kb upstream 13712 true Chr07: 64243699-64257410 Sorghum bicolor
Sobic.007G213700 10.0kb upstream 10.0kb upstream 10000 false Chr07: 64243699-64253698 Sorghum bicolor
Sobic.007G213700 10.0kb downstream 10.0kb downstream 13712 true Chr07: 64253699-64267410 Sorghum bicolor
Sobic.007G213700 10.0kb downstream 10.0kb downstream 10000 false Chr07: 64257411-64267410 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122176792 5267 Panicoideae View MSA
124575339 5269 Grass View MSA
122044965 5273 Angiosperm View MSA
121345609 5274 Embryophyte View MSA
123427199 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.116       Low
cufflinks 57.042     High High
cufflinks 33.071     High  
cufflinks 29.666     High  
cufflinks 0.152       Low
cufflinks 39.243     High  
cufflinks 31.715     High  
cufflinks 93.932     High High
cufflinks 3.514        
cufflinks 5.498        
cufflinks 1.363        
cufflinks 1.678        
cufflinks 0.228       Low
cufflinks 4.726        
cufflinks 18.57     High  
cufflinks 103.297     High High
cufflinks 28.078     High  
cufflinks 33.408     High  
cufflinks 50.28     High High
cufflinks 45.85     High High
cufflinks 0.377        
cufflinks 1.357        
cufflinks 0.647        
cufflinks 0.941        
cufflinks 84.894     High High
cufflinks 87.559     High High
cufflinks 0.487        
cufflinks 0.011     Low Low
cufflinks 35.574     High  
cufflinks 6.073        

0 Strain