Gene : Sobic.007G210900 S. bicolor v3.1.1
Defline:  similar to Putative uncharacterized protein Genomic Order:  2199
Name:  ? Sobic.007G210900 Secondary Identifier:  ? PAC:37935520
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.007G210900 0.5kb upstream 0.5kb upstream 4041 true Chr07: 63981534-63985574 Sorghum bicolor
Sobic.007G210900 0.5kb upstream 0.5kb upstream 500 false Chr07: 63981534-63982033 Sorghum bicolor
Sobic.007G210900 0.5kb downstream 0.5kb downstream 4041 true Chr07: 63982034-63986074 Sorghum bicolor
Sobic.007G210900 0.5kb downstream 0.5kb downstream 500 false Chr07: 63985575-63986074 Sorghum bicolor
Sobic.007G210900 1.0kb upstream 1.0kb upstream 4541 true Chr07: 63981034-63985574 Sorghum bicolor
Sobic.007G210900 1.0kb upstream 1.0kb upstream 1000 false Chr07: 63981034-63982033 Sorghum bicolor
Sobic.007G210900 1.0kb downstream 1.0kb downstream 4541 true Chr07: 63982034-63986574 Sorghum bicolor
Sobic.007G210900 1.0kb downstream 1.0kb downstream 1000 false Chr07: 63985575-63986574 Sorghum bicolor
Sobic.007G210900 2.0kb upstream 2.0kb upstream 5541 true Chr07: 63980034-63985574 Sorghum bicolor
Sobic.007G210900 2.0kb upstream 2.0kb upstream 2000 false Chr07: 63980034-63982033 Sorghum bicolor
Sobic.007G210900 2.0kb downstream 2.0kb downstream 5541 true Chr07: 63982034-63987574 Sorghum bicolor
Sobic.007G210900 2.0kb downstream 2.0kb downstream 2000 false Chr07: 63985575-63987574 Sorghum bicolor
Sobic.007G210900 5.0kb upstream 5.0kb upstream 8541 true Chr07: 63977034-63985574 Sorghum bicolor
Sobic.007G210900 5.0kb upstream 5.0kb upstream 5000 false Chr07: 63977034-63982033 Sorghum bicolor
Sobic.007G210900 5.0kb downstream 5.0kb downstream 8541 true Chr07: 63982034-63990574 Sorghum bicolor
Sobic.007G210900 5.0kb downstream 5.0kb downstream 5000 false Chr07: 63985575-63990574 Sorghum bicolor
Sobic.007G210900 10.0kb upstream 10.0kb upstream 13541 true Chr07: 63972034-63985574 Sorghum bicolor
Sobic.007G210900 10.0kb upstream 10.0kb upstream 10000 false Chr07: 63972034-63982033 Sorghum bicolor
Sobic.007G210900 10.0kb downstream 10.0kb downstream 13541 true Chr07: 63982034-63995574 Sorghum bicolor
Sobic.007G210900 10.0kb downstream 10.0kb downstream 10000 false Chr07: 63985575-63995574 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122177809 5267 Panicoideae View MSA
124580622 5269 Grass View MSA
122049110 5273 Angiosperm View MSA
121351569 5274 Embryophyte View MSA
123382231 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.256        
cufflinks 0.027     Low Low
cufflinks 0.002     Low Low
cufflinks 0.013     Low Low
cufflinks 9.625       High
cufflinks 0.094     Low  
cufflinks 3.484        
cufflinks 1.664        
cufflinks 0.294        
cufflinks 0.734        
cufflinks 1.096        
cufflinks 1.228        
cufflinks 1.016        
cufflinks 1.669        
cufflinks 1.002        
cufflinks 0.011     Low Low
cufflinks 3.462        
cufflinks 3.341        
cufflinks 0.046     Low Low
cufflinks 2.79        
cufflinks 8.469       High
cufflinks 1.619        
cufflinks 1.083        
cufflinks 1.142        
cufflinks 0.02     Low Low
cufflinks 0.034     Low Low
cufflinks 0.451        
cufflinks 0.047     Low Low
cufflinks 7.109       High
cufflinks 2.006        

0 Strain