Gene : Sobic.007G206300 S. bicolor v3.1.1
Defline:  (1 of 3) K02961 - small subunit ribosomal protein S17 (RP-S17, MRPS17, rpsQ) Genomic Order:  2152
Name:  ? Sobic.007G206300 Secondary Identifier:  ? PAC:37937082
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.007G206300 0.5kb upstream 0.5kb upstream 3635 true Chr07: 63620304-63623938 Sorghum bicolor
Sobic.007G206300 0.5kb upstream 0.5kb upstream 500 false Chr07: 63623439-63623938 Sorghum bicolor
Sobic.007G206300 0.5kb downstream 0.5kb downstream 3635 true Chr07: 63619804-63623438 Sorghum bicolor
Sobic.007G206300 0.5kb downstream 0.5kb downstream 500 false Chr07: 63619804-63620303 Sorghum bicolor
Sobic.007G206300 1.0kb upstream 1.0kb upstream 4135 true Chr07: 63620304-63624438 Sorghum bicolor
Sobic.007G206300 1.0kb upstream 1.0kb upstream 1000 false Chr07: 63623439-63624438 Sorghum bicolor
Sobic.007G206300 1.0kb downstream 1.0kb downstream 4135 true Chr07: 63619304-63623438 Sorghum bicolor
Sobic.007G206300 1.0kb downstream 1.0kb downstream 1000 false Chr07: 63619304-63620303 Sorghum bicolor
Sobic.007G206300 2.0kb upstream 2.0kb upstream 5135 true Chr07: 63620304-63625438 Sorghum bicolor
Sobic.007G206300 2.0kb upstream 2.0kb upstream 2000 false Chr07: 63623439-63625438 Sorghum bicolor
Sobic.007G206300 2.0kb downstream 2.0kb downstream 5135 true Chr07: 63618304-63623438 Sorghum bicolor
Sobic.007G206300 2.0kb downstream 2.0kb downstream 2000 false Chr07: 63618304-63620303 Sorghum bicolor
Sobic.007G206300 5.0kb upstream 5.0kb upstream 8135 true Chr07: 63620304-63628438 Sorghum bicolor
Sobic.007G206300 5.0kb upstream 5.0kb upstream 5000 false Chr07: 63623439-63628438 Sorghum bicolor
Sobic.007G206300 5.0kb downstream 5.0kb downstream 8135 true Chr07: 63615304-63623438 Sorghum bicolor
Sobic.007G206300 5.0kb downstream 5.0kb downstream 5000 false Chr07: 63615304-63620303 Sorghum bicolor
Sobic.007G206300 10.0kb upstream 10.0kb upstream 13135 true Chr07: 63620304-63633438 Sorghum bicolor
Sobic.007G206300 10.0kb upstream 10.0kb upstream 10000 false Chr07: 63623439-63633438 Sorghum bicolor
Sobic.007G206300 10.0kb downstream 10.0kb downstream 13135 true Chr07: 63610304-63623438 Sorghum bicolor
Sobic.007G206300 10.0kb downstream 10.0kb downstream 10000 false Chr07: 63610304-63620303 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122200980 5267 Panicoideae View MSA
124585036 5269 Grass View MSA
122045320 5273 Angiosperm View MSA
121347348 5274 Embryophyte View MSA
123424165 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.03       High
cufflinks 0.333       Low
cufflinks 0.601        
cufflinks 1.103        
cufflinks 1.258        
cufflinks 0.797        
cufflinks 0.957        
cufflinks 0.474       Low
cufflinks 1.13        
cufflinks 1.224        
cufflinks 1.285        
cufflinks 1.029        
cufflinks 0.627        
cufflinks 1.401        
cufflinks 1.052        
cufflinks 0.481       Low
cufflinks 0.966        
cufflinks 0.884        
cufflinks 0.373       Low
cufflinks 1.227        
cufflinks 1.805        
cufflinks 2.259       High
cufflinks 1.205        
cufflinks 1.471        
cufflinks 0.43       Low
cufflinks 0.332       Low
cufflinks 0.79        
cufflinks 1.113        
cufflinks 1.191        
cufflinks 1.287        

0 Strain