Gene : Sobic.007G192700 S. bicolor v3.1.1
Defline:  (1 of 3) K03626 - nascent polypeptide-associated complex subunit alpha (EGD2, NACA) Genomic Order:  2011
Name:  ? Sobic.007G192700 Secondary Identifier:  ? PAC:37936957
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0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.007G192700 0.5kb upstream 0.5kb upstream 3283 true Chr07: 62526244-62529526 Sorghum bicolor
Sobic.007G192700 0.5kb upstream 0.5kb upstream 500 false Chr07: 62529027-62529526 Sorghum bicolor
Sobic.007G192700 0.5kb downstream 0.5kb downstream 3283 true Chr07: 62525744-62529026 Sorghum bicolor
Sobic.007G192700 0.5kb downstream 0.5kb downstream 500 false Chr07: 62525744-62526243 Sorghum bicolor
Sobic.007G192700 1.0kb upstream 1.0kb upstream 3783 true Chr07: 62526244-62530026 Sorghum bicolor
Sobic.007G192700 1.0kb upstream 1.0kb upstream 1000 false Chr07: 62529027-62530026 Sorghum bicolor
Sobic.007G192700 1.0kb downstream 1.0kb downstream 3783 true Chr07: 62525244-62529026 Sorghum bicolor
Sobic.007G192700 1.0kb downstream 1.0kb downstream 1000 false Chr07: 62525244-62526243 Sorghum bicolor
Sobic.007G192700 2.0kb upstream 2.0kb upstream 4783 true Chr07: 62526244-62531026 Sorghum bicolor
Sobic.007G192700 2.0kb upstream 2.0kb upstream 2000 false Chr07: 62529027-62531026 Sorghum bicolor
Sobic.007G192700 2.0kb downstream 2.0kb downstream 4783 true Chr07: 62524244-62529026 Sorghum bicolor
Sobic.007G192700 2.0kb downstream 2.0kb downstream 2000 false Chr07: 62524244-62526243 Sorghum bicolor
Sobic.007G192700 5.0kb upstream 5.0kb upstream 7783 true Chr07: 62526244-62534026 Sorghum bicolor
Sobic.007G192700 5.0kb upstream 5.0kb upstream 5000 false Chr07: 62529027-62534026 Sorghum bicolor
Sobic.007G192700 5.0kb downstream 5.0kb downstream 7783 true Chr07: 62521244-62529026 Sorghum bicolor
Sobic.007G192700 5.0kb downstream 5.0kb downstream 5000 false Chr07: 62521244-62526243 Sorghum bicolor
Sobic.007G192700 10.0kb upstream 10.0kb upstream 12783 true Chr07: 62526244-62539026 Sorghum bicolor
Sobic.007G192700 10.0kb upstream 10.0kb upstream 10000 false Chr07: 62529027-62539026 Sorghum bicolor
Sobic.007G192700 10.0kb downstream 10.0kb downstream 12783 true Chr07: 62516244-62529026 Sorghum bicolor
Sobic.007G192700 10.0kb downstream 10.0kb downstream 10000 false Chr07: 62516244-62526243 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122188305 5267 Panicoideae View MSA
124588662 5269 Grass View MSA
122043596 5273 Angiosperm View MSA
121351312 5274 Embryophyte View MSA
123424753 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 225.18     High High
cufflinks 9.087     High Low
cufflinks 30.921     High  
cufflinks 66.311     High  
cufflinks 71.702     High  
cufflinks 38.151     High  
cufflinks 61.411     High  
cufflinks 12.725     High Low
cufflinks 69.297     High  
cufflinks 75.619     High  
cufflinks 93.653     High  
cufflinks 71.514     High  
cufflinks 56.368     High  
cufflinks 79.512     High  
cufflinks 62.345     High  
cufflinks 25.932     High Low
cufflinks 78.295     High  
cufflinks 79.314     High  
cufflinks 25.215     High Low
cufflinks 81.778     High  
cufflinks 99.363     High  
cufflinks 125.504     High High
cufflinks 103.174     High  
cufflinks 105.131     High  
cufflinks 15.177     High Low
cufflinks 6.763     High Low
cufflinks 58.44     High  
cufflinks 74.49     High  
cufflinks 42.293     High  
cufflinks 86.594     High  

0 Strain