Gene : Sobic.007G187200 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR22937//PTHR22937:SF37 - RING FINGER CONTAINING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  1956
Name:  ? Sobic.007G187200 Secondary Identifier:  ? PAC:37935729
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.007G187200 0.5kb upstream 0.5kb upstream 9954 true Chr07: 62010473-62020426 Sorghum bicolor
Sobic.007G187200 0.5kb upstream 0.5kb upstream 500 false Chr07: 62019927-62020426 Sorghum bicolor
Sobic.007G187200 0.5kb downstream 0.5kb downstream 9954 true Chr07: 62009973-62019926 Sorghum bicolor
Sobic.007G187200 0.5kb downstream 0.5kb downstream 500 false Chr07: 62009973-62010472 Sorghum bicolor
Sobic.007G187200 1.0kb upstream 1.0kb upstream 10454 true Chr07: 62010473-62020926 Sorghum bicolor
Sobic.007G187200 1.0kb upstream 1.0kb upstream 1000 false Chr07: 62019927-62020926 Sorghum bicolor
Sobic.007G187200 1.0kb downstream 1.0kb downstream 10454 true Chr07: 62009473-62019926 Sorghum bicolor
Sobic.007G187200 1.0kb downstream 1.0kb downstream 1000 false Chr07: 62009473-62010472 Sorghum bicolor
Sobic.007G187200 2.0kb upstream 2.0kb upstream 11454 true Chr07: 62010473-62021926 Sorghum bicolor
Sobic.007G187200 2.0kb upstream 2.0kb upstream 2000 false Chr07: 62019927-62021926 Sorghum bicolor
Sobic.007G187200 2.0kb downstream 2.0kb downstream 11454 true Chr07: 62008473-62019926 Sorghum bicolor
Sobic.007G187200 2.0kb downstream 2.0kb downstream 2000 false Chr07: 62008473-62010472 Sorghum bicolor
Sobic.007G187200 5.0kb upstream 5.0kb upstream 14454 true Chr07: 62010473-62024926 Sorghum bicolor
Sobic.007G187200 5.0kb upstream 5.0kb upstream 5000 false Chr07: 62019927-62024926 Sorghum bicolor
Sobic.007G187200 5.0kb downstream 5.0kb downstream 14454 true Chr07: 62005473-62019926 Sorghum bicolor
Sobic.007G187200 5.0kb downstream 5.0kb downstream 5000 false Chr07: 62005473-62010472 Sorghum bicolor
Sobic.007G187200 10.0kb upstream 10.0kb upstream 19454 true Chr07: 62010473-62029926 Sorghum bicolor
Sobic.007G187200 10.0kb upstream 10.0kb upstream 10000 false Chr07: 62019927-62029926 Sorghum bicolor
Sobic.007G187200 10.0kb downstream 10.0kb downstream 19454 true Chr07: 62000473-62019926 Sorghum bicolor
Sobic.007G187200 10.0kb downstream 10.0kb downstream 10000 false Chr07: 62000473-62010472 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122179492 5267 Panicoideae View MSA
124576907 5269 Grass View MSA
122049263 5273 Angiosperm View MSA
121311321 5274 Embryophyte View MSA
123348631 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.848       Low
cufflinks 3.091       Low
cufflinks 3.374       Low
cufflinks 3.219       Low
cufflinks 6.014        
cufflinks 5.098        
cufflinks 5.63        
cufflinks 4.176        
cufflinks 5.744        
cufflinks 6.187        
cufflinks 4.555        
cufflinks 5.462        
cufflinks 7.129       High
cufflinks 5.563        
cufflinks 6.415        
cufflinks 4.21        
cufflinks 5.293        
cufflinks 5.677        
cufflinks 5.854        
cufflinks 5.979        
cufflinks 6.53        
cufflinks 5.947        
cufflinks 5.169        
cufflinks 5.712        
cufflinks 4.027        
cufflinks 2.964       Low
cufflinks 5.773        
cufflinks 1.472       Low
cufflinks 6.5        
cufflinks 5.727        

0 Strain