Gene : Sobic.008G017800 S. bicolor v3.1.1
Defline:  (1 of 6) K01209 - alpha-N-arabinofuranosidase (E3.2.1.55, abfA) Genomic Order:  182
Name:  ? Sobic.008G017800 Secondary Identifier:  ? PAC:37927275
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.008G017800 0.5kb upstream 0.5kb upstream 6846   true Chr08: 1441606-1448451 Sorghum bicolor
Sobic.008G017800 0.5kb upstream 0.5kb upstream 500   false Chr08: 1447952-1448451 Sorghum bicolor
Sobic.008G017800 0.5kb downstream 0.5kb downstream 6846   true Chr08: 1441106-1447951 Sorghum bicolor
Sobic.008G017800 0.5kb downstream 0.5kb downstream 500   false Chr08: 1441106-1441605 Sorghum bicolor
Sobic.008G017800 1.0kb upstream 1.0kb upstream 7346   true Chr08: 1441606-1448951 Sorghum bicolor
Sobic.008G017800 1.0kb upstream 1.0kb upstream 1000   false Chr08: 1447952-1448951 Sorghum bicolor
Sobic.008G017800 1.0kb downstream 1.0kb downstream 7346   true Chr08: 1440606-1447951 Sorghum bicolor
Sobic.008G017800 1.0kb downstream 1.0kb downstream 1000   false Chr08: 1440606-1441605 Sorghum bicolor
Sobic.008G017800 2.0kb upstream 2.0kb upstream 8346   true Chr08: 1441606-1449951 Sorghum bicolor
Sobic.008G017800 2.0kb upstream 2.0kb upstream 2000   false Chr08: 1447952-1449951 Sorghum bicolor
Sobic.008G017800 2.0kb downstream 2.0kb downstream 8346   true Chr08: 1439606-1447951 Sorghum bicolor
Sobic.008G017800 2.0kb downstream 2.0kb downstream 2000   false Chr08: 1439606-1441605 Sorghum bicolor
Sobic.008G017800 5.0kb upstream 5.0kb upstream 11346   true Chr08: 1441606-1452951 Sorghum bicolor
Sobic.008G017800 5.0kb upstream 5.0kb upstream 5000   false Chr08: 1447952-1452951 Sorghum bicolor
Sobic.008G017800 5.0kb downstream 5.0kb downstream 11346   true Chr08: 1436606-1447951 Sorghum bicolor
Sobic.008G017800 5.0kb downstream 5.0kb downstream 5000   false Chr08: 1436606-1441605 Sorghum bicolor
Sobic.008G017800 10.0kb upstream 10.0kb upstream 16346   true Chr08: 1441606-1457951 Sorghum bicolor
Sobic.008G017800 10.0kb upstream 10.0kb upstream 10000   false Chr08: 1447952-1457951 Sorghum bicolor
Sobic.008G017800 10.0kb downstream 10.0kb downstream 16346   true Chr08: 1431606-1447951 Sorghum bicolor
Sobic.008G017800 10.0kb downstream 10.0kb downstream 10000   false Chr08: 1431606-1441605 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122192842 5267 Panicoideae View MSA
124578027 5269 Grass View MSA
122044822 5273 Angiosperm View MSA
121344375 5274 Embryophyte View MSA
123428022 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.008       Low
cufflinks 9.789     High Low
cufflinks 16.7     High  
cufflinks 12.954     High Low
cufflinks 19.979     High  
cufflinks 16.214     High  
cufflinks 35.678     High  
cufflinks 34.036     High  
cufflinks 13.701     High Low
cufflinks 13.704     High Low
cufflinks 63.93     High High
cufflinks 30.743     High  
cufflinks 36.348     High  
cufflinks 45.487     High High
cufflinks 35.371     High  
cufflinks 19.825     High  
cufflinks 34.249     High  
cufflinks 40.961     High High
cufflinks 23.435     High  
cufflinks 24.017     High  
cufflinks 13.562       Low
cufflinks 25.58     High  
cufflinks 37.847     High  
cufflinks 35.18     High  
cufflinks 9.844     High Low
cufflinks 10.427     High Low
cufflinks 46.552     High High
cufflinks 23.608     High  
cufflinks 57.973     High High
cufflinks 35.192     High  

0 Strain