Gene : Sobic.008G016100 S. bicolor v3.1.1
Defline:  (1 of 1) K14848 - ribosome assembly protein RRB1 (RRB1, GRWD1) Genomic Order:  163
Name:  ? Sobic.008G016100 Secondary Identifier:  ? PAC:37926776
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.008G016100 0.5kb upstream 0.5kb upstream 4659   true Chr08: 1330991-1335649 Sorghum bicolor
Sobic.008G016100 0.5kb upstream 0.5kb upstream 500   false Chr08: 1330991-1331490 Sorghum bicolor
Sobic.008G016100 0.5kb downstream 0.5kb downstream 4659   true Chr08: 1331491-1336149 Sorghum bicolor
Sobic.008G016100 0.5kb downstream 0.5kb downstream 500   false Chr08: 1335650-1336149 Sorghum bicolor
Sobic.008G016100 1.0kb upstream 1.0kb upstream 5159   true Chr08: 1330491-1335649 Sorghum bicolor
Sobic.008G016100 1.0kb upstream 1.0kb upstream 1000   false Chr08: 1330491-1331490 Sorghum bicolor
Sobic.008G016100 1.0kb downstream 1.0kb downstream 5159   true Chr08: 1331491-1336649 Sorghum bicolor
Sobic.008G016100 1.0kb downstream 1.0kb downstream 1000   false Chr08: 1335650-1336649 Sorghum bicolor
Sobic.008G016100 2.0kb upstream 2.0kb upstream 6159   true Chr08: 1329491-1335649 Sorghum bicolor
Sobic.008G016100 2.0kb upstream 2.0kb upstream 2000   false Chr08: 1329491-1331490 Sorghum bicolor
Sobic.008G016100 2.0kb downstream 2.0kb downstream 6159   true Chr08: 1331491-1337649 Sorghum bicolor
Sobic.008G016100 2.0kb downstream 2.0kb downstream 2000   false Chr08: 1335650-1337649 Sorghum bicolor
Sobic.008G016100 5.0kb upstream 5.0kb upstream 9159   true Chr08: 1326491-1335649 Sorghum bicolor
Sobic.008G016100 5.0kb upstream 5.0kb upstream 5000   false Chr08: 1326491-1331490 Sorghum bicolor
Sobic.008G016100 5.0kb downstream 5.0kb downstream 9159   true Chr08: 1331491-1340649 Sorghum bicolor
Sobic.008G016100 5.0kb downstream 5.0kb downstream 5000   false Chr08: 1335650-1340649 Sorghum bicolor
Sobic.008G016100 10.0kb upstream 10.0kb upstream 14159   true Chr08: 1321491-1335649 Sorghum bicolor
Sobic.008G016100 10.0kb upstream 10.0kb upstream 10000   false Chr08: 1321491-1331490 Sorghum bicolor
Sobic.008G016100 10.0kb downstream 10.0kb downstream 14159   true Chr08: 1331491-1345649 Sorghum bicolor
Sobic.008G016100 10.0kb downstream 10.0kb downstream 10000   false Chr08: 1335650-1345649 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122185580 5267 Panicoideae View MSA
124589941 5269 Grass View MSA
122048731 5273 Angiosperm View MSA
121348301 5274 Embryophyte View MSA
123425749 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 43.607     High High
cufflinks 2.682       Low
cufflinks 7.861        
cufflinks 13.066     High  
cufflinks 14.582     High  
cufflinks 8.048        
cufflinks 10.759        
cufflinks 4.187       Low
cufflinks 17.57     High  
cufflinks 18.403     High  
cufflinks 13.055     High  
cufflinks 16.29     High  
cufflinks 11.59     High  
cufflinks 15.367     High  
cufflinks 11.911     High  
cufflinks 6.384       Low
cufflinks 11.321        
cufflinks 11.99     High  
cufflinks 5.536       Low
cufflinks 13.259     High  
cufflinks 18.285     High  
cufflinks 16.858     High  
cufflinks 18.259     High  
cufflinks 18.443     High  
cufflinks 6.355       Low
cufflinks 2.804       Low
cufflinks 15.65     High  
cufflinks 35.979     High High
cufflinks 9.674        
cufflinks 18.074     High  

0 Strain