Gene : Sobic.008G011901 S. bicolor v3.1.1
Defline:  (1 of 2) PTHR23086//PTHR23086:SF43 - PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE // SUBFAMILY NOT NAMED Genomic Order:  120
Name:  ? Sobic.008G011901 Secondary Identifier:  ? PAC:37926133
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor PWY-6351 Sorghum bicolor pathologic  
Sbicolor PWY-6352 Sorghum bicolor pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.008G011901 0.5kb upstream 0.5kb upstream 3390   true Chr08: 990725-994114 Sorghum bicolor
Sobic.008G011901 0.5kb upstream 0.5kb upstream 500   false Chr08: 990725-991224 Sorghum bicolor
Sobic.008G011901 0.5kb downstream 0.5kb downstream 3390   true Chr08: 991225-994614 Sorghum bicolor
Sobic.008G011901 0.5kb downstream 0.5kb downstream 500   false Chr08: 994115-994614 Sorghum bicolor
Sobic.008G011901 1.0kb upstream 1.0kb upstream 3890   true Chr08: 990225-994114 Sorghum bicolor
Sobic.008G011901 1.0kb upstream 1.0kb upstream 1000   false Chr08: 990225-991224 Sorghum bicolor
Sobic.008G011901 1.0kb downstream 1.0kb downstream 3890   true Chr08: 991225-995114 Sorghum bicolor
Sobic.008G011901 1.0kb downstream 1.0kb downstream 1000   false Chr08: 994115-995114 Sorghum bicolor
Sobic.008G011901 2.0kb upstream 2.0kb upstream 4890   true Chr08: 989225-994114 Sorghum bicolor
Sobic.008G011901 2.0kb upstream 2.0kb upstream 2000   false Chr08: 989225-991224 Sorghum bicolor
Sobic.008G011901 2.0kb downstream 2.0kb downstream 4890   true Chr08: 991225-996114 Sorghum bicolor
Sobic.008G011901 2.0kb downstream 2.0kb downstream 2000   false Chr08: 994115-996114 Sorghum bicolor
Sobic.008G011901 5.0kb upstream 5.0kb upstream 7890   true Chr08: 986225-994114 Sorghum bicolor
Sobic.008G011901 5.0kb upstream 5.0kb upstream 5000   false Chr08: 986225-991224 Sorghum bicolor
Sobic.008G011901 5.0kb downstream 5.0kb downstream 7890   true Chr08: 991225-999114 Sorghum bicolor
Sobic.008G011901 5.0kb downstream 5.0kb downstream 5000   false Chr08: 994115-999114 Sorghum bicolor
Sobic.008G011901 10.0kb upstream 10.0kb upstream 12890   true Chr08: 981225-994114 Sorghum bicolor
Sobic.008G011901 10.0kb upstream 10.0kb upstream 10000   false Chr08: 981225-991224 Sorghum bicolor
Sobic.008G011901 10.0kb downstream 10.0kb downstream 12890   true Chr08: 991225-1004114 Sorghum bicolor
Sobic.008G011901 10.0kb downstream 10.0kb downstream 10000   false Chr08: 994115-1004114 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027967 5273 Angiosperm View MSA
122195445 5267 Panicoideae View MSA
124576600 5269 Grass View MSA
121349579 5274 Embryophyte View MSA
123428114 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.026     Low  
cufflinks 0.013     Low  
cufflinks 0.045     Low  
cufflinks 0.005     Low Low
cufflinks 0.037     Low  
cufflinks 0.007     Low Low
cufflinks 0.018     Low  
cufflinks 0.023     Low  
cufflinks 0.011     Low  
cufflinks 0.055     Low  
cufflinks 0.285       High
cufflinks 0.308       High
cufflinks 0.027     Low  
cufflinks 0.24       High
cufflinks 7.476       High
cufflinks 0.011     Low  
cufflinks 0.02     Low  
cufflinks 0.013     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.007     Low Low
cufflinks 0.008     Low Low
cufflinks 0.063     Low  
cufflinks 0.158        
cufflinks 0.126        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low Low
cufflinks 0.208       High
cufflinks 0.008     Low Low
cufflinks 0.062     Low  
cufflinks 0.124        

0 Strain