Gene : Sobic.008G010300 S. bicolor v3.1.1
Defline:  (1 of 68) PF07762 - Protein of unknown function (DUF1618) (DUF1618) Genomic Order:  102
Name:  ? Sobic.008G010300 Secondary Identifier:  ? PAC:37928724
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.008G010300 0.5kb upstream 0.5kb upstream 3682   true Chr08: 832724-836405 Sorghum bicolor
Sobic.008G010300 0.5kb upstream 0.5kb upstream 500   false Chr08: 835906-836405 Sorghum bicolor
Sobic.008G010300 0.5kb downstream 0.5kb downstream 3682   true Chr08: 832224-835905 Sorghum bicolor
Sobic.008G010300 0.5kb downstream 0.5kb downstream 500   false Chr08: 832224-832723 Sorghum bicolor
Sobic.008G010300 1.0kb upstream 1.0kb upstream 4182   true Chr08: 832724-836905 Sorghum bicolor
Sobic.008G010300 1.0kb upstream 1.0kb upstream 1000   false Chr08: 835906-836905 Sorghum bicolor
Sobic.008G010300 1.0kb downstream 1.0kb downstream 4182   true Chr08: 831724-835905 Sorghum bicolor
Sobic.008G010300 1.0kb downstream 1.0kb downstream 1000   false Chr08: 831724-832723 Sorghum bicolor
Sobic.008G010300 2.0kb upstream 2.0kb upstream 5182   true Chr08: 832724-837905 Sorghum bicolor
Sobic.008G010300 2.0kb upstream 2.0kb upstream 2000   false Chr08: 835906-837905 Sorghum bicolor
Sobic.008G010300 2.0kb downstream 2.0kb downstream 5182   true Chr08: 830724-835905 Sorghum bicolor
Sobic.008G010300 2.0kb downstream 2.0kb downstream 2000   false Chr08: 830724-832723 Sorghum bicolor
Sobic.008G010300 5.0kb upstream 5.0kb upstream 8182   true Chr08: 832724-840905 Sorghum bicolor
Sobic.008G010300 5.0kb upstream 5.0kb upstream 5000   false Chr08: 835906-840905 Sorghum bicolor
Sobic.008G010300 5.0kb downstream 5.0kb downstream 8182   true Chr08: 827724-835905 Sorghum bicolor
Sobic.008G010300 5.0kb downstream 5.0kb downstream 5000   false Chr08: 827724-832723 Sorghum bicolor
Sobic.008G010300 10.0kb upstream 10.0kb upstream 13182   true Chr08: 832724-845905 Sorghum bicolor
Sobic.008G010300 10.0kb upstream 10.0kb upstream 10000   false Chr08: 835906-845905 Sorghum bicolor
Sobic.008G010300 10.0kb downstream 10.0kb downstream 13182   true Chr08: 822724-835905 Sorghum bicolor
Sobic.008G010300 10.0kb downstream 10.0kb downstream 10000   false Chr08: 822724-832723 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121994770 5273 Angiosperm View MSA
122146454 5267 Panicoideae Singleton cluster - no MSA
124585583 5269 Grass View MSA
121264986 5274 Embryophyte View MSA
123303402 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.009     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.039     Low  
cufflinks 0.009     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.138       High
cufflinks 0.057     Low  
cufflinks 0.003     Low Low
cufflinks 0.065     Low High
cufflinks 0.02     Low  
cufflinks 0.012     Low  
cufflinks 0.212       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.041     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.015     Low  
cufflinks 0.009     Low  
cufflinks 0.016     Low  
cufflinks 0.005     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.01     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.26       High

0 Strain