Gene : Sobic.008G008500 S. bicolor v3.1.1
Defline:  (1 of 2) PTHR13832:SF199 - PROTEIN PHOSPHATASE 2C 65-RELATED Genomic Order:  83
Name:  ? Sobic.008G008500 Secondary Identifier:  ? PAC:37926584
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.008G008500 0.5kb upstream 0.5kb upstream 3492   true Chr08: 656345-659836 Sorghum bicolor
Sobic.008G008500 0.5kb upstream 0.5kb upstream 500   false Chr08: 656345-656844 Sorghum bicolor
Sobic.008G008500 0.5kb downstream 0.5kb downstream 3492   true Chr08: 656845-660336 Sorghum bicolor
Sobic.008G008500 0.5kb downstream 0.5kb downstream 500   false Chr08: 659837-660336 Sorghum bicolor
Sobic.008G008500 1.0kb upstream 1.0kb upstream 3992   true Chr08: 655845-659836 Sorghum bicolor
Sobic.008G008500 1.0kb upstream 1.0kb upstream 1000   false Chr08: 655845-656844 Sorghum bicolor
Sobic.008G008500 1.0kb downstream 1.0kb downstream 3992   true Chr08: 656845-660836 Sorghum bicolor
Sobic.008G008500 1.0kb downstream 1.0kb downstream 1000   false Chr08: 659837-660836 Sorghum bicolor
Sobic.008G008500 2.0kb upstream 2.0kb upstream 4992   true Chr08: 654845-659836 Sorghum bicolor
Sobic.008G008500 2.0kb upstream 2.0kb upstream 2000   false Chr08: 654845-656844 Sorghum bicolor
Sobic.008G008500 2.0kb downstream 2.0kb downstream 4992   true Chr08: 656845-661836 Sorghum bicolor
Sobic.008G008500 2.0kb downstream 2.0kb downstream 2000   false Chr08: 659837-661836 Sorghum bicolor
Sobic.008G008500 5.0kb upstream 5.0kb upstream 7992   true Chr08: 651845-659836 Sorghum bicolor
Sobic.008G008500 5.0kb upstream 5.0kb upstream 5000   false Chr08: 651845-656844 Sorghum bicolor
Sobic.008G008500 5.0kb downstream 5.0kb downstream 7992   true Chr08: 656845-664836 Sorghum bicolor
Sobic.008G008500 5.0kb downstream 5.0kb downstream 5000   false Chr08: 659837-664836 Sorghum bicolor
Sobic.008G008500 10.0kb upstream 10.0kb upstream 12992   true Chr08: 646845-659836 Sorghum bicolor
Sobic.008G008500 10.0kb upstream 10.0kb upstream 10000   false Chr08: 646845-656844 Sorghum bicolor
Sobic.008G008500 10.0kb downstream 10.0kb downstream 12992   true Chr08: 656845-669836 Sorghum bicolor
Sobic.008G008500 10.0kb downstream 10.0kb downstream 10000   false Chr08: 659837-669836 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122196181 5267 Panicoideae View MSA
124590709 5269 Grass View MSA
122048670 5273 Angiosperm View MSA
121311066 5274 Embryophyte View MSA
123426661 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.153        
cufflinks 1.61        
cufflinks 0.114       Low
cufflinks 0.148        
cufflinks 0.954        
cufflinks 0.264        
cufflinks 5.031       High
cufflinks 10.806     High High
cufflinks 0.086       Low
cufflinks 0.178        
cufflinks 0.127        
cufflinks 0.174        
cufflinks 0.182        
cufflinks 0.227        
cufflinks 1.428        
cufflinks 0.961        
cufflinks 4.772       High
cufflinks 4.365       High
cufflinks 0.42        
cufflinks 3.524       High
cufflinks 5.362       High
cufflinks 0.171        
cufflinks 0.038     Low Low
cufflinks 0.135        
cufflinks 1.856        
cufflinks 3.569       High
cufflinks 0.2        
cufflinks 0.061     Low Low
cufflinks 7.386       High
cufflinks 1.784        

0 Strain