Gene : Sobic.008G006100 S. bicolor v3.1.1
Defline:  (1 of 2) PTHR11206:SF101 - MATE EFFLUX FAMILY PROTEIN 2, CHLOROPLASTIC Genomic Order:  58
Name:  ? Sobic.008G006100 Secondary Identifier:  ? PAC:37926922
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.008G006100 0.5kb upstream 0.5kb upstream 4343   true Chr08: 513005-517347 Sorghum bicolor
Sobic.008G006100 0.5kb upstream 0.5kb upstream 500   false Chr08: 513005-513504 Sorghum bicolor
Sobic.008G006100 0.5kb downstream 0.5kb downstream 4343   true Chr08: 513505-517847 Sorghum bicolor
Sobic.008G006100 0.5kb downstream 0.5kb downstream 500   false Chr08: 517348-517847 Sorghum bicolor
Sobic.008G006100 1.0kb upstream 1.0kb upstream 4843   true Chr08: 512505-517347 Sorghum bicolor
Sobic.008G006100 1.0kb upstream 1.0kb upstream 1000   false Chr08: 512505-513504 Sorghum bicolor
Sobic.008G006100 1.0kb downstream 1.0kb downstream 4843   true Chr08: 513505-518347 Sorghum bicolor
Sobic.008G006100 1.0kb downstream 1.0kb downstream 1000   false Chr08: 517348-518347 Sorghum bicolor
Sobic.008G006100 2.0kb upstream 2.0kb upstream 5843   true Chr08: 511505-517347 Sorghum bicolor
Sobic.008G006100 2.0kb upstream 2.0kb upstream 2000   false Chr08: 511505-513504 Sorghum bicolor
Sobic.008G006100 2.0kb downstream 2.0kb downstream 5843   true Chr08: 513505-519347 Sorghum bicolor
Sobic.008G006100 2.0kb downstream 2.0kb downstream 2000   false Chr08: 517348-519347 Sorghum bicolor
Sobic.008G006100 5.0kb upstream 5.0kb upstream 8843   true Chr08: 508505-517347 Sorghum bicolor
Sobic.008G006100 5.0kb upstream 5.0kb upstream 5000   false Chr08: 508505-513504 Sorghum bicolor
Sobic.008G006100 5.0kb downstream 5.0kb downstream 8843   true Chr08: 513505-522347 Sorghum bicolor
Sobic.008G006100 5.0kb downstream 5.0kb downstream 5000   false Chr08: 517348-522347 Sorghum bicolor
Sobic.008G006100 10.0kb upstream 10.0kb upstream 13843   true Chr08: 503505-517347 Sorghum bicolor
Sobic.008G006100 10.0kb upstream 10.0kb upstream 10000   false Chr08: 503505-513504 Sorghum bicolor
Sobic.008G006100 10.0kb downstream 10.0kb downstream 13843   true Chr08: 513505-527347 Sorghum bicolor
Sobic.008G006100 10.0kb downstream 10.0kb downstream 10000   false Chr08: 517348-527347 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122189752 5267 Panicoideae View MSA
124588550 5269 Grass View MSA
122046968 5273 Angiosperm View MSA
121348626 5274 Embryophyte View MSA
123428603 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.574       Low
cufflinks 9.612     High High
cufflinks 8.634       High
cufflinks 6.027        
cufflinks 2.424        
cufflinks 5.775        
cufflinks 6.304        
cufflinks 10.078     High High
cufflinks 5.359        
cufflinks 5.38        
cufflinks 0.402       Low
cufflinks 1.052        
cufflinks 4.328        
cufflinks 1.009        
cufflinks 4.207        
cufflinks 8.676       High
cufflinks 5.586        
cufflinks 7.436        
cufflinks 6.001        
cufflinks 5.229        
cufflinks 3.299        
cufflinks 0.923        
cufflinks 0.687       Low
cufflinks 0.66       Low
cufflinks 10.673     High High
cufflinks 11.187     High High
cufflinks 1.421        
cufflinks 0.046     Low Low
cufflinks 8.819       High
cufflinks 3.375        

0 Strain