Gene : Sobic.008G002800 S. bicolor v3.1.1
Defline:  (1 of 6) K10257 - omega-3 fatty acid desaturase (delta-15 desaturase) (FAD8, desB) Genomic Order:  28
Name:  ? Sobic.008G002800 Secondary Identifier:  ? PAC:37927207
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.008G002800 0.5kb upstream 0.5kb upstream 3181   true Chr08: 248885-252065 Sorghum bicolor
Sobic.008G002800 0.5kb upstream 0.5kb upstream 500   false Chr08: 251566-252065 Sorghum bicolor
Sobic.008G002800 0.5kb downstream 0.5kb downstream 3181   true Chr08: 248385-251565 Sorghum bicolor
Sobic.008G002800 0.5kb downstream 0.5kb downstream 500   false Chr08: 248385-248884 Sorghum bicolor
Sobic.008G002800 1.0kb upstream 1.0kb upstream 3681   true Chr08: 248885-252565 Sorghum bicolor
Sobic.008G002800 1.0kb upstream 1.0kb upstream 1000   false Chr08: 251566-252565 Sorghum bicolor
Sobic.008G002800 1.0kb downstream 1.0kb downstream 3681   true Chr08: 247885-251565 Sorghum bicolor
Sobic.008G002800 1.0kb downstream 1.0kb downstream 1000   false Chr08: 247885-248884 Sorghum bicolor
Sobic.008G002800 2.0kb upstream 2.0kb upstream 4681   true Chr08: 248885-253565 Sorghum bicolor
Sobic.008G002800 2.0kb upstream 2.0kb upstream 2000   false Chr08: 251566-253565 Sorghum bicolor
Sobic.008G002800 2.0kb downstream 2.0kb downstream 4681   true Chr08: 246885-251565 Sorghum bicolor
Sobic.008G002800 2.0kb downstream 2.0kb downstream 2000   false Chr08: 246885-248884 Sorghum bicolor
Sobic.008G002800 5.0kb upstream 5.0kb upstream 7681   true Chr08: 248885-256565 Sorghum bicolor
Sobic.008G002800 5.0kb upstream 5.0kb upstream 5000   false Chr08: 251566-256565 Sorghum bicolor
Sobic.008G002800 5.0kb downstream 5.0kb downstream 7681   true Chr08: 243885-251565 Sorghum bicolor
Sobic.008G002800 5.0kb downstream 5.0kb downstream 5000   false Chr08: 243885-248884 Sorghum bicolor
Sobic.008G002800 10.0kb upstream 10.0kb upstream 12681   true Chr08: 248885-261565 Sorghum bicolor
Sobic.008G002800 10.0kb upstream 10.0kb upstream 10000   false Chr08: 251566-261565 Sorghum bicolor
Sobic.008G002800 10.0kb downstream 10.0kb downstream 12681   true Chr08: 238885-251565 Sorghum bicolor
Sobic.008G002800 10.0kb downstream 10.0kb downstream 10000   false Chr08: 238885-248884 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122019953 5273 Angiosperm View MSA
122193070 5267 Panicoideae View MSA
124581434 5269 Grass View MSA
121351532 5274 Embryophyte View MSA
123426688 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.059     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.011     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.025     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.027     Low  
cufflinks 0.013     Low  
cufflinks 0.02     Low  
cufflinks 0.006     Low Low
cufflinks 4.359       High
cufflinks 10.871       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 22.142     High High
cufflinks 0.398        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.044     Low  
cufflinks 0.066     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.022     Low  
cufflinks 0.018     Low  
cufflinks 5.952       High
cufflinks 22.118     High High
cufflinks 19.621     High High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.005     Low Low
cufflinks 2.702        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.012     Low  
cufflinks 0.058     Low  

0 Strain