Gene : Sobic.007G225600 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR31307//PTHR31307:SF17 - FAMILY NOT NAMED // GENOMIC DNA, CHROMOSOME 3, TAC CLONE:K7P8 Genomic Order:  2353
Name:  ? Sobic.007G225600 Secondary Identifier:  ? PAC:37936881
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.007G225600 0.5kb upstream 0.5kb upstream 1818 true Chr07: 65300284-65302101 Sorghum bicolor
Sobic.007G225600 0.5kb upstream 0.5kb upstream 500 false Chr07: 65301602-65302101 Sorghum bicolor
Sobic.007G225600 0.5kb downstream 0.5kb downstream 1818 true Chr07: 65299784-65301601 Sorghum bicolor
Sobic.007G225600 0.5kb downstream 0.5kb downstream 500 false Chr07: 65299784-65300283 Sorghum bicolor
Sobic.007G225600 1.0kb upstream 1.0kb upstream 2318 true Chr07: 65300284-65302601 Sorghum bicolor
Sobic.007G225600 1.0kb upstream 1.0kb upstream 1000 false Chr07: 65301602-65302601 Sorghum bicolor
Sobic.007G225600 1.0kb downstream 1.0kb downstream 2318 true Chr07: 65299284-65301601 Sorghum bicolor
Sobic.007G225600 1.0kb downstream 1.0kb downstream 1000 false Chr07: 65299284-65300283 Sorghum bicolor
Sobic.007G225600 2.0kb upstream 2.0kb upstream 3318 true Chr07: 65300284-65303601 Sorghum bicolor
Sobic.007G225600 2.0kb upstream 2.0kb upstream 2000 false Chr07: 65301602-65303601 Sorghum bicolor
Sobic.007G225600 2.0kb downstream 2.0kb downstream 3318 true Chr07: 65298284-65301601 Sorghum bicolor
Sobic.007G225600 2.0kb downstream 2.0kb downstream 2000 false Chr07: 65298284-65300283 Sorghum bicolor
Sobic.007G225600 5.0kb upstream 5.0kb upstream 6318 true Chr07: 65300284-65306601 Sorghum bicolor
Sobic.007G225600 5.0kb upstream 5.0kb upstream 5000 false Chr07: 65301602-65306601 Sorghum bicolor
Sobic.007G225600 5.0kb downstream 5.0kb downstream 6318 true Chr07: 65295284-65301601 Sorghum bicolor
Sobic.007G225600 5.0kb downstream 5.0kb downstream 5000 false Chr07: 65295284-65300283 Sorghum bicolor
Sobic.007G225600 10.0kb upstream 10.0kb upstream 11318 true Chr07: 65300284-65311601 Sorghum bicolor
Sobic.007G225600 10.0kb upstream 10.0kb upstream 10000 false Chr07: 65301602-65311601 Sorghum bicolor
Sobic.007G225600 10.0kb downstream 10.0kb downstream 11318 true Chr07: 65290284-65301601 Sorghum bicolor
Sobic.007G225600 10.0kb downstream 10.0kb downstream 10000 false Chr07: 65290284-65300283 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122177075 5267 Panicoideae View MSA
124573144 5269 Grass View MSA
122048588 5273 Angiosperm View MSA
121351505 5274 Embryophyte View MSA
123382195 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.245       High
cufflinks 0.984        
cufflinks 0.492       Low
cufflinks 0.972        
cufflinks 0.656        
cufflinks 1.997       High
cufflinks 1.162        
cufflinks 1.099        
cufflinks 0.46       Low
cufflinks 0.578        
cufflinks 0.519        
cufflinks 0.697        
cufflinks 0.514        
cufflinks 0.921        
cufflinks 0.697        
cufflinks 0.753        
cufflinks 0.958        
cufflinks 0.836        
cufflinks 1.988       High
cufflinks 0.67        
cufflinks 1.128        
cufflinks 1.439        
cufflinks 0.69        
cufflinks 0.54        
cufflinks 1.086        
cufflinks 0.963        
cufflinks 0.354       Low
cufflinks 2.273       High
cufflinks 1.434        
cufflinks 0.875        

0 Strain