Gene : Sobic.007G221100 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR10774//PTHR10774:SF97 - EXTENDED SYNAPTOTAGMIN-RELATED // SUBFAMILY NOT NAMED Genomic Order:  2305
Name:  ? Sobic.007G221100 Secondary Identifier:  ? PAC:37936180
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.007G221100 0.5kb upstream 0.5kb upstream 8333 true Chr07: 64935734-64944066 Sorghum bicolor
Sobic.007G221100 0.5kb upstream 0.5kb upstream 500 false Chr07: 64943567-64944066 Sorghum bicolor
Sobic.007G221100 0.5kb downstream 0.5kb downstream 8333 true Chr07: 64935234-64943566 Sorghum bicolor
Sobic.007G221100 0.5kb downstream 0.5kb downstream 500 false Chr07: 64935234-64935733 Sorghum bicolor
Sobic.007G221100 1.0kb upstream 1.0kb upstream 8833 true Chr07: 64935734-64944566 Sorghum bicolor
Sobic.007G221100 1.0kb upstream 1.0kb upstream 1000 false Chr07: 64943567-64944566 Sorghum bicolor
Sobic.007G221100 1.0kb downstream 1.0kb downstream 8833 true Chr07: 64934734-64943566 Sorghum bicolor
Sobic.007G221100 1.0kb downstream 1.0kb downstream 1000 false Chr07: 64934734-64935733 Sorghum bicolor
Sobic.007G221100 2.0kb upstream 2.0kb upstream 9833 true Chr07: 64935734-64945566 Sorghum bicolor
Sobic.007G221100 2.0kb upstream 2.0kb upstream 2000 false Chr07: 64943567-64945566 Sorghum bicolor
Sobic.007G221100 2.0kb downstream 2.0kb downstream 9833 true Chr07: 64933734-64943566 Sorghum bicolor
Sobic.007G221100 2.0kb downstream 2.0kb downstream 2000 false Chr07: 64933734-64935733 Sorghum bicolor
Sobic.007G221100 5.0kb upstream 5.0kb upstream 12833 true Chr07: 64935734-64948566 Sorghum bicolor
Sobic.007G221100 5.0kb upstream 5.0kb upstream 5000 false Chr07: 64943567-64948566 Sorghum bicolor
Sobic.007G221100 5.0kb downstream 5.0kb downstream 12833 true Chr07: 64930734-64943566 Sorghum bicolor
Sobic.007G221100 5.0kb downstream 5.0kb downstream 5000 false Chr07: 64930734-64935733 Sorghum bicolor
Sobic.007G221100 10.0kb upstream 10.0kb upstream 17833 true Chr07: 64935734-64953566 Sorghum bicolor
Sobic.007G221100 10.0kb upstream 10.0kb upstream 10000 false Chr07: 64943567-64953566 Sorghum bicolor
Sobic.007G221100 10.0kb downstream 10.0kb downstream 17833 true Chr07: 64925734-64943566 Sorghum bicolor
Sobic.007G221100 10.0kb downstream 10.0kb downstream 10000 false Chr07: 64925734-64935733 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122188936 5267 Panicoideae View MSA
124575327 5269 Grass View MSA
122044186 5273 Angiosperm View MSA
121350183 5274 Embryophyte View MSA
123381609 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.431       Low
cufflinks 0.261       Low
cufflinks 2.614        
cufflinks 2.1        
cufflinks 2.098        
cufflinks 0.412       Low
cufflinks 0.963        
cufflinks 0.549       Low
cufflinks 1.306        
cufflinks 1.278        
cufflinks 3.633       High
cufflinks 4.786       High
cufflinks 1.59        
cufflinks 3.876       High
cufflinks 1.167        
cufflinks 0.879        
cufflinks 1.009        
cufflinks 0.903        
cufflinks 1.014        
cufflinks 1.568        
cufflinks 2.195        
cufflinks 2.174        
cufflinks 3.105       High
cufflinks 2.958        
cufflinks 0.896        
cufflinks 0.514       Low
cufflinks 5.962       High
cufflinks 0.957        
cufflinks 0.395       Low
cufflinks 0.804        

0 Strain