Gene : Sobic.007G219200 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR10766//PTHR10766:SF44 - TRANSMEMBRANE 9 SUPERFAMILY PROTEIN // ENDOMEMBRANE FAMILY PROTEIN 70 Genomic Order:  2285
Name:  ? Sobic.007G219200 Secondary Identifier:  ? PAC:37935788
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.007G219200 0.5kb upstream 0.5kb upstream 4015 true Chr07: 64749436-64753450 Sorghum bicolor
Sobic.007G219200 0.5kb upstream 0.5kb upstream 500 false Chr07: 64749436-64749935 Sorghum bicolor
Sobic.007G219200 0.5kb downstream 0.5kb downstream 4015 true Chr07: 64749936-64753950 Sorghum bicolor
Sobic.007G219200 0.5kb downstream 0.5kb downstream 500 false Chr07: 64753451-64753950 Sorghum bicolor
Sobic.007G219200 1.0kb upstream 1.0kb upstream 4515 true Chr07: 64748936-64753450 Sorghum bicolor
Sobic.007G219200 1.0kb upstream 1.0kb upstream 1000 false Chr07: 64748936-64749935 Sorghum bicolor
Sobic.007G219200 1.0kb downstream 1.0kb downstream 4515 true Chr07: 64749936-64754450 Sorghum bicolor
Sobic.007G219200 1.0kb downstream 1.0kb downstream 1000 false Chr07: 64753451-64754450 Sorghum bicolor
Sobic.007G219200 2.0kb upstream 2.0kb upstream 5515 true Chr07: 64747936-64753450 Sorghum bicolor
Sobic.007G219200 2.0kb upstream 2.0kb upstream 2000 false Chr07: 64747936-64749935 Sorghum bicolor
Sobic.007G219200 2.0kb downstream 2.0kb downstream 5515 true Chr07: 64749936-64755450 Sorghum bicolor
Sobic.007G219200 2.0kb downstream 2.0kb downstream 2000 false Chr07: 64753451-64755450 Sorghum bicolor
Sobic.007G219200 5.0kb upstream 5.0kb upstream 8515 true Chr07: 64744936-64753450 Sorghum bicolor
Sobic.007G219200 5.0kb upstream 5.0kb upstream 5000 false Chr07: 64744936-64749935 Sorghum bicolor
Sobic.007G219200 5.0kb downstream 5.0kb downstream 8515 true Chr07: 64749936-64758450 Sorghum bicolor
Sobic.007G219200 5.0kb downstream 5.0kb downstream 5000 false Chr07: 64753451-64758450 Sorghum bicolor
Sobic.007G219200 10.0kb upstream 10.0kb upstream 13515 true Chr07: 64739936-64753450 Sorghum bicolor
Sobic.007G219200 10.0kb upstream 10.0kb upstream 10000 false Chr07: 64739936-64749935 Sorghum bicolor
Sobic.007G219200 10.0kb downstream 10.0kb downstream 13515 true Chr07: 64749936-64763450 Sorghum bicolor
Sobic.007G219200 10.0kb downstream 10.0kb downstream 10000 false Chr07: 64753451-64763450 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122179612 5267 Panicoideae View MSA
124574936 5269 Grass View MSA
122044185 5273 Angiosperm View MSA
121349188 5274 Embryophyte View MSA
123426870 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 28.967     High  
cufflinks 3.29       Low
cufflinks 15.41     High  
cufflinks 20.85     High  
cufflinks 50.56     High High
cufflinks 14.323     High  
cufflinks 22.897     High  
cufflinks 5.992       Low
cufflinks 31.327     High  
cufflinks 33.556     High  
cufflinks 22.925     High  
cufflinks 25.225     High  
cufflinks 33.384     High  
cufflinks 25.856     High  
cufflinks 29.84     High  
cufflinks 8.684       Low
cufflinks 24.826     High  
cufflinks 23.648     High  
cufflinks 12.186     High  
cufflinks 25.489     High  
cufflinks 43.516     High High
cufflinks 26.131     High  
cufflinks 28.722     High  
cufflinks 30.169     High  
cufflinks 4.583       Low
cufflinks 3.005       Low
cufflinks 19.749     High  
cufflinks 15.089     High  
cufflinks 17.769     High  
cufflinks 36.068     High  

0 Strain