Gene : Sobic.008G051000 S. bicolor v3.1.1
Defline:  (1 of 1) K03405 - magnesium chelatase subunit I (chlI, bchI) Genomic Order:  522
Name:  ? Sobic.008G051000 Secondary Identifier:  ? PAC:37927628
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor CHLOROPHYLL-SYN Sorghum bicolor pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.008G051000 0.5kb upstream 0.5kb upstream 2410   true Chr08: 5060921-5063330 Sorghum bicolor
Sobic.008G051000 0.5kb upstream 0.5kb upstream 500   false Chr08: 5062831-5063330 Sorghum bicolor
Sobic.008G051000 0.5kb downstream 0.5kb downstream 2410   true Chr08: 5060421-5062830 Sorghum bicolor
Sobic.008G051000 0.5kb downstream 0.5kb downstream 500   false Chr08: 5060421-5060920 Sorghum bicolor
Sobic.008G051000 1.0kb upstream 1.0kb upstream 2910   true Chr08: 5060921-5063830 Sorghum bicolor
Sobic.008G051000 1.0kb upstream 1.0kb upstream 1000   false Chr08: 5062831-5063830 Sorghum bicolor
Sobic.008G051000 1.0kb downstream 1.0kb downstream 2910   true Chr08: 5059921-5062830 Sorghum bicolor
Sobic.008G051000 1.0kb downstream 1.0kb downstream 1000   false Chr08: 5059921-5060920 Sorghum bicolor
Sobic.008G051000 2.0kb upstream 2.0kb upstream 3910   true Chr08: 5060921-5064830 Sorghum bicolor
Sobic.008G051000 2.0kb upstream 2.0kb upstream 2000   false Chr08: 5062831-5064830 Sorghum bicolor
Sobic.008G051000 2.0kb downstream 2.0kb downstream 3910   true Chr08: 5058921-5062830 Sorghum bicolor
Sobic.008G051000 2.0kb downstream 2.0kb downstream 2000   false Chr08: 5058921-5060920 Sorghum bicolor
Sobic.008G051000 5.0kb upstream 5.0kb upstream 6910   true Chr08: 5060921-5067830 Sorghum bicolor
Sobic.008G051000 5.0kb upstream 5.0kb upstream 5000   false Chr08: 5062831-5067830 Sorghum bicolor
Sobic.008G051000 5.0kb downstream 5.0kb downstream 6910   true Chr08: 5055921-5062830 Sorghum bicolor
Sobic.008G051000 5.0kb downstream 5.0kb downstream 5000   false Chr08: 5055921-5060920 Sorghum bicolor
Sobic.008G051000 10.0kb upstream 10.0kb upstream 11910   true Chr08: 5060921-5072830 Sorghum bicolor
Sobic.008G051000 10.0kb upstream 10.0kb upstream 10000   false Chr08: 5062831-5072830 Sorghum bicolor
Sobic.008G051000 10.0kb downstream 10.0kb downstream 11910   true Chr08: 5050921-5062830 Sorghum bicolor
Sobic.008G051000 10.0kb downstream 10.0kb downstream 10000   false Chr08: 5050921-5060920 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026298 5273 Angiosperm View MSA
122178518 5267 Panicoideae View MSA
124584000 5269 Grass View MSA
121346302 5274 Embryophyte View MSA
123426232 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.069        
cufflinks 92.068     High High
cufflinks 42.648     High  
cufflinks 19.877     High  
cufflinks 20.762     High  
cufflinks 44.438     High  
cufflinks 137.215     High High
cufflinks 277.844     High High
cufflinks 8.813        
cufflinks 7.094        
cufflinks 1.361       Low
cufflinks 1.396       Low
cufflinks 13.054     High  
cufflinks 1.745       Low
cufflinks 19.173     High  
cufflinks 51.487     High  
cufflinks 126.21     High High
cufflinks 138.498     High High
cufflinks 56.313     High  
cufflinks 52.899     High  
cufflinks 20.551     High  
cufflinks 2.167       Low
cufflinks 2.189       Low
cufflinks 2.433       Low
cufflinks 35.549     High  
cufflinks 127.092     High High
cufflinks 0.858       Low
cufflinks 0.809       Low
cufflinks 356.366     High High
cufflinks 24.604     High  

0 Strain