Gene : Sobic.008G042800 S. bicolor v3.1.1
Defline:  (1 of 2) PTHR11638//PTHR11638:SF115 - ATP-DEPENDENT CLP PROTEASE // SUBFAMILY NOT NAMED Genomic Order:  441
Name:  ? Sobic.008G042800 Secondary Identifier:  ? PAC:37926113
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.008G042800 0.5kb upstream 0.5kb upstream 2898   true Chr08: 4207967-4210864 Sorghum bicolor
Sobic.008G042800 0.5kb upstream 0.5kb upstream 500   false Chr08: 4210365-4210864 Sorghum bicolor
Sobic.008G042800 0.5kb downstream 0.5kb downstream 2898   true Chr08: 4207467-4210364 Sorghum bicolor
Sobic.008G042800 0.5kb downstream 0.5kb downstream 500   false Chr08: 4207467-4207966 Sorghum bicolor
Sobic.008G042800 1.0kb upstream 1.0kb upstream 3398   true Chr08: 4207967-4211364 Sorghum bicolor
Sobic.008G042800 1.0kb upstream 1.0kb upstream 1000   false Chr08: 4210365-4211364 Sorghum bicolor
Sobic.008G042800 1.0kb downstream 1.0kb downstream 3398   true Chr08: 4206967-4210364 Sorghum bicolor
Sobic.008G042800 1.0kb downstream 1.0kb downstream 1000   false Chr08: 4206967-4207966 Sorghum bicolor
Sobic.008G042800 2.0kb upstream 2.0kb upstream 4398   true Chr08: 4207967-4212364 Sorghum bicolor
Sobic.008G042800 2.0kb upstream 2.0kb upstream 2000   false Chr08: 4210365-4212364 Sorghum bicolor
Sobic.008G042800 2.0kb downstream 2.0kb downstream 4398   true Chr08: 4205967-4210364 Sorghum bicolor
Sobic.008G042800 2.0kb downstream 2.0kb downstream 2000   false Chr08: 4205967-4207966 Sorghum bicolor
Sobic.008G042800 5.0kb upstream 5.0kb upstream 7398   true Chr08: 4207967-4215364 Sorghum bicolor
Sobic.008G042800 5.0kb upstream 5.0kb upstream 5000   false Chr08: 4210365-4215364 Sorghum bicolor
Sobic.008G042800 5.0kb downstream 5.0kb downstream 7398   true Chr08: 4202967-4210364 Sorghum bicolor
Sobic.008G042800 5.0kb downstream 5.0kb downstream 5000   false Chr08: 4202967-4207966 Sorghum bicolor
Sobic.008G042800 10.0kb upstream 10.0kb upstream 12398   true Chr08: 4207967-4220364 Sorghum bicolor
Sobic.008G042800 10.0kb upstream 10.0kb upstream 10000   false Chr08: 4210365-4220364 Sorghum bicolor
Sobic.008G042800 10.0kb downstream 10.0kb downstream 12398   true Chr08: 4197967-4210364 Sorghum bicolor
Sobic.008G042800 10.0kb downstream 10.0kb downstream 10000   false Chr08: 4197967-4207966 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122189515 5267 Panicoideae View MSA
124589779 5269 Grass View MSA
122049419 5273 Angiosperm View MSA
121351273 5274 Embryophyte View MSA
123382090 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.056     Low  
cufflinks 0.026     Low Low
cufflinks 0.006     Low Low
cufflinks 0.059     Low  
cufflinks 0.13        
cufflinks 0.149        
cufflinks 0.132        
cufflinks 0.278       High
cufflinks 0.237       High
cufflinks 0.36       High
cufflinks 0.067     Low  
cufflinks 0.106     Low  
cufflinks 0.123        
cufflinks 0.091     Low  
cufflinks 0.057     Low  
cufflinks 0.027     Low Low
cufflinks 0.112        
cufflinks 0.093     Low  
cufflinks 0.041     Low  
cufflinks 0.258       High
cufflinks 0.266       High
cufflinks 0.048     Low  
cufflinks 0.117        
cufflinks 0.06     Low  
cufflinks 0.024     Low Low
cufflinks 0.044        
cufflinks 0.044     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.193        
cufflinks 0.041     Low  

0 Strain