Gene : Sobic.008G028200 S. bicolor v3.1.1
Defline:  (1 of 91) PF01357 - Pollen allergen (Pollen_allerg_1) Genomic Order:  288
Name:  ? Sobic.008G028200 Secondary Identifier:  ? PAC:37926139
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.008G028200 0.5kb upstream 0.5kb upstream 866   true Chr08: 2512596-2513461 Sorghum bicolor
Sobic.008G028200 0.5kb upstream 0.5kb upstream 500   false Chr08: 2512962-2513461 Sorghum bicolor
Sobic.008G028200 0.5kb downstream 0.5kb downstream 866   true Chr08: 2512096-2512961 Sorghum bicolor
Sobic.008G028200 0.5kb downstream 0.5kb downstream 500   false Chr08: 2512096-2512595 Sorghum bicolor
Sobic.008G028200 1.0kb upstream 1.0kb upstream 1366   true Chr08: 2512596-2513961 Sorghum bicolor
Sobic.008G028200 1.0kb upstream 1.0kb upstream 1000   false Chr08: 2512962-2513961 Sorghum bicolor
Sobic.008G028200 1.0kb downstream 1.0kb downstream 1366   true Chr08: 2511596-2512961 Sorghum bicolor
Sobic.008G028200 1.0kb downstream 1.0kb downstream 1000   false Chr08: 2511596-2512595 Sorghum bicolor
Sobic.008G028200 2.0kb upstream 2.0kb upstream 2366   true Chr08: 2512596-2514961 Sorghum bicolor
Sobic.008G028200 2.0kb upstream 2.0kb upstream 2000   false Chr08: 2512962-2514961 Sorghum bicolor
Sobic.008G028200 2.0kb downstream 2.0kb downstream 2366   true Chr08: 2510596-2512961 Sorghum bicolor
Sobic.008G028200 2.0kb downstream 2.0kb downstream 2000   false Chr08: 2510596-2512595 Sorghum bicolor
Sobic.008G028200 5.0kb upstream 5.0kb upstream 5366   true Chr08: 2512596-2517961 Sorghum bicolor
Sobic.008G028200 5.0kb upstream 5.0kb upstream 5000   false Chr08: 2512962-2517961 Sorghum bicolor
Sobic.008G028200 5.0kb downstream 5.0kb downstream 5366   true Chr08: 2507596-2512961 Sorghum bicolor
Sobic.008G028200 5.0kb downstream 5.0kb downstream 5000   false Chr08: 2507596-2512595 Sorghum bicolor
Sobic.008G028200 10.0kb upstream 10.0kb upstream 10366   true Chr08: 2512596-2522961 Sorghum bicolor
Sobic.008G028200 10.0kb upstream 10.0kb upstream 10000   false Chr08: 2512962-2522961 Sorghum bicolor
Sobic.008G028200 10.0kb downstream 10.0kb downstream 10366   true Chr08: 2502596-2512961 Sorghum bicolor
Sobic.008G028200 10.0kb downstream 10.0kb downstream 10000   false Chr08: 2502596-2512595 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121996156 5273 Angiosperm View MSA
122199224 5267 Panicoideae View MSA
124590797 5269 Grass View MSA
121266324 5274 Embryophyte View MSA
123304666 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.813        
cufflinks 0.16        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.099     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 784.842     High High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.067     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.03     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.061     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.114        

0 Strain