Gene : Sobic.008G028100 S. bicolor v3.1.1
Defline:  (1 of 91) PF01357 - Pollen allergen (Pollen_allerg_1) Genomic Order:  287
Name:  ? Sobic.008G028100 Secondary Identifier:  ? PAC:37928331
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.008G028100 0.5kb upstream 0.5kb upstream 866   true Chr08: 2501299-2502164 Sorghum bicolor
Sobic.008G028100 0.5kb upstream 0.5kb upstream 500   false Chr08: 2501665-2502164 Sorghum bicolor
Sobic.008G028100 0.5kb downstream 0.5kb downstream 866   true Chr08: 2500799-2501664 Sorghum bicolor
Sobic.008G028100 0.5kb downstream 0.5kb downstream 500   false Chr08: 2500799-2501298 Sorghum bicolor
Sobic.008G028100 1.0kb upstream 1.0kb upstream 1366   true Chr08: 2501299-2502664 Sorghum bicolor
Sobic.008G028100 1.0kb upstream 1.0kb upstream 1000   false Chr08: 2501665-2502664 Sorghum bicolor
Sobic.008G028100 1.0kb downstream 1.0kb downstream 1366   true Chr08: 2500299-2501664 Sorghum bicolor
Sobic.008G028100 1.0kb downstream 1.0kb downstream 1000   false Chr08: 2500299-2501298 Sorghum bicolor
Sobic.008G028100 2.0kb upstream 2.0kb upstream 2366   true Chr08: 2501299-2503664 Sorghum bicolor
Sobic.008G028100 2.0kb upstream 2.0kb upstream 2000   false Chr08: 2501665-2503664 Sorghum bicolor
Sobic.008G028100 2.0kb downstream 2.0kb downstream 2366   true Chr08: 2499299-2501664 Sorghum bicolor
Sobic.008G028100 2.0kb downstream 2.0kb downstream 2000   false Chr08: 2499299-2501298 Sorghum bicolor
Sobic.008G028100 5.0kb upstream 5.0kb upstream 5366   true Chr08: 2501299-2506664 Sorghum bicolor
Sobic.008G028100 5.0kb upstream 5.0kb upstream 5000   false Chr08: 2501665-2506664 Sorghum bicolor
Sobic.008G028100 5.0kb downstream 5.0kb downstream 5366   true Chr08: 2496299-2501664 Sorghum bicolor
Sobic.008G028100 5.0kb downstream 5.0kb downstream 5000   false Chr08: 2496299-2501298 Sorghum bicolor
Sobic.008G028100 10.0kb upstream 10.0kb upstream 10366   true Chr08: 2501299-2511664 Sorghum bicolor
Sobic.008G028100 10.0kb upstream 10.0kb upstream 10000   false Chr08: 2501665-2511664 Sorghum bicolor
Sobic.008G028100 10.0kb downstream 10.0kb downstream 10366   true Chr08: 2491299-2501664 Sorghum bicolor
Sobic.008G028100 10.0kb downstream 10.0kb downstream 10000   false Chr08: 2491299-2501298 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121996156 5273 Angiosperm View MSA
122199224 5267 Panicoideae View MSA
124590797 5269 Grass View MSA
121266324 5274 Embryophyte View MSA
123304666 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.153        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.525        
cufflinks 0.099        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.049     Low  
cufflinks 0.17        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 663.219     High High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.062     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.06        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.014        

0 Strain