Gene : Sobic.008G024700 S. bicolor v3.1.1
Defline:  (1 of 29) PF04525 - LURP-one-related (LOR) Genomic Order:  253
Name:  ? Sobic.008G024700 Secondary Identifier:  ? PAC:37926767
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.008G024700 0.5kb upstream 0.5kb upstream 4096   true Chr08: 2208321-2212416 Sorghum bicolor
Sobic.008G024700 0.5kb upstream 0.5kb upstream 500   false Chr08: 2208321-2208820 Sorghum bicolor
Sobic.008G024700 0.5kb downstream 0.5kb downstream 4096   true Chr08: 2208821-2212916 Sorghum bicolor
Sobic.008G024700 0.5kb downstream 0.5kb downstream 500   false Chr08: 2212417-2212916 Sorghum bicolor
Sobic.008G024700 1.0kb upstream 1.0kb upstream 4596   true Chr08: 2207821-2212416 Sorghum bicolor
Sobic.008G024700 1.0kb upstream 1.0kb upstream 1000   false Chr08: 2207821-2208820 Sorghum bicolor
Sobic.008G024700 1.0kb downstream 1.0kb downstream 4596   true Chr08: 2208821-2213416 Sorghum bicolor
Sobic.008G024700 1.0kb downstream 1.0kb downstream 1000   false Chr08: 2212417-2213416 Sorghum bicolor
Sobic.008G024700 2.0kb upstream 2.0kb upstream 5596   true Chr08: 2206821-2212416 Sorghum bicolor
Sobic.008G024700 2.0kb upstream 2.0kb upstream 2000   false Chr08: 2206821-2208820 Sorghum bicolor
Sobic.008G024700 2.0kb downstream 2.0kb downstream 5596   true Chr08: 2208821-2214416 Sorghum bicolor
Sobic.008G024700 2.0kb downstream 2.0kb downstream 2000   false Chr08: 2212417-2214416 Sorghum bicolor
Sobic.008G024700 5.0kb upstream 5.0kb upstream 8596   true Chr08: 2203821-2212416 Sorghum bicolor
Sobic.008G024700 5.0kb upstream 5.0kb upstream 5000   false Chr08: 2203821-2208820 Sorghum bicolor
Sobic.008G024700 5.0kb downstream 5.0kb downstream 8596   true Chr08: 2208821-2217416 Sorghum bicolor
Sobic.008G024700 5.0kb downstream 5.0kb downstream 5000   false Chr08: 2212417-2217416 Sorghum bicolor
Sobic.008G024700 10.0kb upstream 10.0kb upstream 13596   true Chr08: 2198821-2212416 Sorghum bicolor
Sobic.008G024700 10.0kb upstream 10.0kb upstream 10000   false Chr08: 2198821-2208820 Sorghum bicolor
Sobic.008G024700 10.0kb downstream 10.0kb downstream 13596   true Chr08: 2208821-2222416 Sorghum bicolor
Sobic.008G024700 10.0kb downstream 10.0kb downstream 10000   false Chr08: 2212417-2222416 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122194387 5267 Panicoideae View MSA
124581066 5269 Grass View MSA
122048664 5273 Angiosperm View MSA
121311063 5274 Embryophyte View MSA
123348415 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.027     Low Low
cufflinks 2.465       High
cufflinks 0.603        
cufflinks 0.68        
cufflinks 0.011     Low Low
cufflinks 0.47        
cufflinks 0.857        
cufflinks 0.681        
cufflinks 0.547        
cufflinks 1.583       High
cufflinks 0.116        
cufflinks 0.235        
cufflinks 0.093        
cufflinks 0.056     Low  
cufflinks 0.337        
cufflinks 1.697       High
cufflinks 0.69        
cufflinks 0.898        
cufflinks 1.307       High
cufflinks 1.197       High
cufflinks 0.007     Low Low
cufflinks 0.184        
cufflinks 0.108        
cufflinks 0.097        
cufflinks 1.544       High
cufflinks 0.942        
cufflinks 0.057     Low  
cufflinks 0.019     Low Low
cufflinks 0.349        
cufflinks 0.269        

0 Strain