Gene : Sobic.008G021300 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR23308//PTHR23308:SF29 - NUCLEAR INHIBITOR OF PROTEIN PHOSPHATASE-1 // SUBFAMILY NOT NAMED Genomic Order:  221
Name:  ? Sobic.008G021300 Secondary Identifier:  ? PAC:37928116
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.008G021300 0.5kb upstream 0.5kb upstream 2660   true Chr08: 1838352-1841011 Sorghum bicolor
Sobic.008G021300 0.5kb upstream 0.5kb upstream 500   false Chr08: 1840512-1841011 Sorghum bicolor
Sobic.008G021300 0.5kb downstream 0.5kb downstream 2660   true Chr08: 1837852-1840511 Sorghum bicolor
Sobic.008G021300 0.5kb downstream 0.5kb downstream 500   false Chr08: 1837852-1838351 Sorghum bicolor
Sobic.008G021300 1.0kb upstream 1.0kb upstream 3160   true Chr08: 1838352-1841511 Sorghum bicolor
Sobic.008G021300 1.0kb upstream 1.0kb upstream 1000   false Chr08: 1840512-1841511 Sorghum bicolor
Sobic.008G021300 1.0kb downstream 1.0kb downstream 3160   true Chr08: 1837352-1840511 Sorghum bicolor
Sobic.008G021300 1.0kb downstream 1.0kb downstream 1000   false Chr08: 1837352-1838351 Sorghum bicolor
Sobic.008G021300 2.0kb upstream 2.0kb upstream 4160   true Chr08: 1838352-1842511 Sorghum bicolor
Sobic.008G021300 2.0kb upstream 2.0kb upstream 2000   false Chr08: 1840512-1842511 Sorghum bicolor
Sobic.008G021300 2.0kb downstream 2.0kb downstream 4160   true Chr08: 1836352-1840511 Sorghum bicolor
Sobic.008G021300 2.0kb downstream 2.0kb downstream 2000   false Chr08: 1836352-1838351 Sorghum bicolor
Sobic.008G021300 5.0kb upstream 5.0kb upstream 7160   true Chr08: 1838352-1845511 Sorghum bicolor
Sobic.008G021300 5.0kb upstream 5.0kb upstream 5000   false Chr08: 1840512-1845511 Sorghum bicolor
Sobic.008G021300 5.0kb downstream 5.0kb downstream 7160   true Chr08: 1833352-1840511 Sorghum bicolor
Sobic.008G021300 5.0kb downstream 5.0kb downstream 5000   false Chr08: 1833352-1838351 Sorghum bicolor
Sobic.008G021300 10.0kb upstream 10.0kb upstream 12160   true Chr08: 1838352-1850511 Sorghum bicolor
Sobic.008G021300 10.0kb upstream 10.0kb upstream 10000   false Chr08: 1840512-1850511 Sorghum bicolor
Sobic.008G021300 10.0kb downstream 10.0kb downstream 12160   true Chr08: 1828352-1840511 Sorghum bicolor
Sobic.008G021300 10.0kb downstream 10.0kb downstream 10000   false Chr08: 1828352-1838351 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122198411 5267 Panicoideae View MSA
124583819 5269 Grass View MSA
122042553 5273 Angiosperm View MSA
121344574 5274 Embryophyte View MSA
123426095 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.036     Low Low
cufflinks 288.288     High High
cufflinks 74.472     High  
cufflinks 36.45     High  
cufflinks 3.326        
cufflinks 39.213     High  
cufflinks 61.757     High  
cufflinks 240.899     High High
cufflinks 3.145        
cufflinks 1.274        
cufflinks 0.121       Low
cufflinks 0.071     Low Low
cufflinks 3.209        
cufflinks 0.138       Low
cufflinks 17.846     High  
cufflinks 149.768     High High
cufflinks 63.272     High  
cufflinks 63.805     High  
cufflinks 97.788     High High
cufflinks 47.581     High  
cufflinks 3.777        
cufflinks 0.064     Low Low
cufflinks 0.074     Low Low
cufflinks 0.213        
cufflinks 131.021     High High
cufflinks 249.994     High High
cufflinks 0.007     Low Low
cufflinks 0.029     Low Low
cufflinks 113.645     High High
cufflinks 16.286     High  

0 Strain