Gene : Sobic.008G021700 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR30560//PTHR30560:SF3 - TRIGGER FACTOR CHAPERONE AND PEPTIDYL-PROLYL CIS/TRANS ISOMERASE // TRIGGER FACTOR-LIKE PROTEIN TIG Genomic Order:  225
Name:  ? Sobic.008G021700 Secondary Identifier:  ? PAC:37928406
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.008G021700 0.5kb upstream 0.5kb upstream 5953   true Chr08: 1880058-1886010 Sorghum bicolor
Sobic.008G021700 0.5kb upstream 0.5kb upstream 500   false Chr08: 1885511-1886010 Sorghum bicolor
Sobic.008G021700 0.5kb downstream 0.5kb downstream 5953   true Chr08: 1879558-1885510 Sorghum bicolor
Sobic.008G021700 0.5kb downstream 0.5kb downstream 500   false Chr08: 1879558-1880057 Sorghum bicolor
Sobic.008G021700 1.0kb upstream 1.0kb upstream 6453   true Chr08: 1880058-1886510 Sorghum bicolor
Sobic.008G021700 1.0kb upstream 1.0kb upstream 1000   false Chr08: 1885511-1886510 Sorghum bicolor
Sobic.008G021700 1.0kb downstream 1.0kb downstream 6453   true Chr08: 1879058-1885510 Sorghum bicolor
Sobic.008G021700 1.0kb downstream 1.0kb downstream 1000   false Chr08: 1879058-1880057 Sorghum bicolor
Sobic.008G021700 2.0kb upstream 2.0kb upstream 7453   true Chr08: 1880058-1887510 Sorghum bicolor
Sobic.008G021700 2.0kb upstream 2.0kb upstream 2000   false Chr08: 1885511-1887510 Sorghum bicolor
Sobic.008G021700 2.0kb downstream 2.0kb downstream 7453   true Chr08: 1878058-1885510 Sorghum bicolor
Sobic.008G021700 2.0kb downstream 2.0kb downstream 2000   false Chr08: 1878058-1880057 Sorghum bicolor
Sobic.008G021700 5.0kb upstream 5.0kb upstream 10453   true Chr08: 1880058-1890510 Sorghum bicolor
Sobic.008G021700 5.0kb upstream 5.0kb upstream 5000   false Chr08: 1885511-1890510 Sorghum bicolor
Sobic.008G021700 5.0kb downstream 5.0kb downstream 10453   true Chr08: 1875058-1885510 Sorghum bicolor
Sobic.008G021700 5.0kb downstream 5.0kb downstream 5000   false Chr08: 1875058-1880057 Sorghum bicolor
Sobic.008G021700 10.0kb upstream 10.0kb upstream 15453   true Chr08: 1880058-1895510 Sorghum bicolor
Sobic.008G021700 10.0kb upstream 10.0kb upstream 10000   false Chr08: 1885511-1895510 Sorghum bicolor
Sobic.008G021700 10.0kb downstream 10.0kb downstream 15453   true Chr08: 1870058-1885510 Sorghum bicolor
Sobic.008G021700 10.0kb downstream 10.0kb downstream 10000   false Chr08: 1870058-1880057 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122187759 5267 Panicoideae View MSA
124570933 5269 Grass View MSA
122042238 5273 Angiosperm View MSA
121345514 5274 Embryophyte View MSA
123423774 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.459        
cufflinks 9.139     High  
cufflinks 12.47     High High
cufflinks 4.05        
cufflinks 3.371        
cufflinks 7.292        
cufflinks 15.791     High High
cufflinks 23.695     High High
cufflinks 2.534        
cufflinks 2.775        
cufflinks 0.503       Low
cufflinks 0.55       Low
cufflinks 2.032        
cufflinks 0.683       Low
cufflinks 7.961        
cufflinks 7.367        
cufflinks 13.543     High High
cufflinks 21.317     High High
cufflinks 6.562        
cufflinks 6.63        
cufflinks 5.36        
cufflinks 0.716       Low
cufflinks 0.434       Low
cufflinks 0.516       Low
cufflinks 3.537        
cufflinks 10.177     High  
cufflinks 0.448       Low
cufflinks 0.53       Low
cufflinks 30.618     High High
cufflinks 9.535        

0 Strain