Gene : Sobic.008G084600 S. bicolor v3.1.1
Defline:  (1 of 3) PTHR23359//PTHR23359:SF99 - NUCLEOTIDE KINASE // SUBFAMILY NOT NAMED Genomic Order:  874
Name:  ? Sobic.008G084600 Secondary Identifier:  ? PAC:37927191
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor PWY-7219 Sorghum bicolor pathologic  
Sbicolor PWY-7229 Sorghum bicolor pathologic  
Sbicolor PWY-841 Sorghum bicolor pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.008G084600 0.5kb upstream 0.5kb upstream 4004   true Chr08: 16241981-16245984 Sorghum bicolor
Sobic.008G084600 0.5kb upstream 0.5kb upstream 500   false Chr08: 16241981-16242480 Sorghum bicolor
Sobic.008G084600 0.5kb downstream 0.5kb downstream 4004   true Chr08: 16242481-16246484 Sorghum bicolor
Sobic.008G084600 0.5kb downstream 0.5kb downstream 500   false Chr08: 16245985-16246484 Sorghum bicolor
Sobic.008G084600 1.0kb upstream 1.0kb upstream 4504   true Chr08: 16241481-16245984 Sorghum bicolor
Sobic.008G084600 1.0kb upstream 1.0kb upstream 1000   false Chr08: 16241481-16242480 Sorghum bicolor
Sobic.008G084600 1.0kb downstream 1.0kb downstream 4504   true Chr08: 16242481-16246984 Sorghum bicolor
Sobic.008G084600 1.0kb downstream 1.0kb downstream 1000   false Chr08: 16245985-16246984 Sorghum bicolor
Sobic.008G084600 2.0kb upstream 2.0kb upstream 5504   true Chr08: 16240481-16245984 Sorghum bicolor
Sobic.008G084600 2.0kb upstream 2.0kb upstream 2000   false Chr08: 16240481-16242480 Sorghum bicolor
Sobic.008G084600 2.0kb downstream 2.0kb downstream 5504   true Chr08: 16242481-16247984 Sorghum bicolor
Sobic.008G084600 2.0kb downstream 2.0kb downstream 2000   false Chr08: 16245985-16247984 Sorghum bicolor
Sobic.008G084600 5.0kb upstream 5.0kb upstream 8504   true Chr08: 16237481-16245984 Sorghum bicolor
Sobic.008G084600 5.0kb upstream 5.0kb upstream 5000   false Chr08: 16237481-16242480 Sorghum bicolor
Sobic.008G084600 5.0kb downstream 5.0kb downstream 8504   true Chr08: 16242481-16250984 Sorghum bicolor
Sobic.008G084600 5.0kb downstream 5.0kb downstream 5000   false Chr08: 16245985-16250984 Sorghum bicolor
Sobic.008G084600 10.0kb upstream 10.0kb upstream 13504   true Chr08: 16232481-16245984 Sorghum bicolor
Sobic.008G084600 10.0kb upstream 10.0kb upstream 10000   false Chr08: 16232481-16242480 Sorghum bicolor
Sobic.008G084600 10.0kb downstream 10.0kb downstream 13504   true Chr08: 16242481-16255984 Sorghum bicolor
Sobic.008G084600 10.0kb downstream 10.0kb downstream 10000   false Chr08: 16245985-16255984 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041419 5273 Angiosperm View MSA
122192416 5267 Panicoideae View MSA
124587378 5269 Grass View MSA
121350908 5274 Embryophyte View MSA
123427854 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 28.874     High High
cufflinks 1.282       Low
cufflinks 3.17       Low
cufflinks 7.06        
cufflinks 11.605        
cufflinks 3.626       Low
cufflinks 14.156     High  
cufflinks 5.789        
cufflinks 6.408        
cufflinks 8.466        
cufflinks 23.485     High  
cufflinks 19.353     High  
cufflinks 16.582     High  
cufflinks 25.359     High  
cufflinks 12.481     High  
cufflinks 3.085       Low
cufflinks 17.75     High  
cufflinks 18.473     High  
cufflinks 1.69       Low
cufflinks 14.124     High  
cufflinks 11.715        
cufflinks 27.887     High High
cufflinks 27.377     High  
cufflinks 26.621     High  
cufflinks 0.944       Low
cufflinks 1.529       Low
cufflinks 19.87     High  
cufflinks 5.666        
cufflinks 23.297     High  
cufflinks 15.497     High  

0 Strain