Gene : Sobic.008G082900 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR23089:SF7 - HIT FAMILY PROTEIN 1 Genomic Order:  858
Name:  ? Sobic.008G082900 Secondary Identifier:  ? PAC:37926931
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.008G082900 0.5kb upstream 0.5kb upstream 5609   true Chr08: 15758295-15763903 Sorghum bicolor
Sobic.008G082900 0.5kb upstream 0.5kb upstream 500   false Chr08: 15758295-15758794 Sorghum bicolor
Sobic.008G082900 0.5kb downstream 0.5kb downstream 5609   true Chr08: 15758795-15764403 Sorghum bicolor
Sobic.008G082900 0.5kb downstream 0.5kb downstream 500   false Chr08: 15763904-15764403 Sorghum bicolor
Sobic.008G082900 1.0kb upstream 1.0kb upstream 6109   true Chr08: 15757795-15763903 Sorghum bicolor
Sobic.008G082900 1.0kb upstream 1.0kb upstream 1000   false Chr08: 15757795-15758794 Sorghum bicolor
Sobic.008G082900 1.0kb downstream 1.0kb downstream 6109   true Chr08: 15758795-15764903 Sorghum bicolor
Sobic.008G082900 1.0kb downstream 1.0kb downstream 1000   false Chr08: 15763904-15764903 Sorghum bicolor
Sobic.008G082900 2.0kb upstream 2.0kb upstream 7109   true Chr08: 15756795-15763903 Sorghum bicolor
Sobic.008G082900 2.0kb upstream 2.0kb upstream 2000   false Chr08: 15756795-15758794 Sorghum bicolor
Sobic.008G082900 2.0kb downstream 2.0kb downstream 7109   true Chr08: 15758795-15765903 Sorghum bicolor
Sobic.008G082900 2.0kb downstream 2.0kb downstream 2000   false Chr08: 15763904-15765903 Sorghum bicolor
Sobic.008G082900 5.0kb upstream 5.0kb upstream 10109   true Chr08: 15753795-15763903 Sorghum bicolor
Sobic.008G082900 5.0kb upstream 5.0kb upstream 5000   false Chr08: 15753795-15758794 Sorghum bicolor
Sobic.008G082900 5.0kb downstream 5.0kb downstream 10109   true Chr08: 15758795-15768903 Sorghum bicolor
Sobic.008G082900 5.0kb downstream 5.0kb downstream 5000   false Chr08: 15763904-15768903 Sorghum bicolor
Sobic.008G082900 10.0kb upstream 10.0kb upstream 15109   true Chr08: 15748795-15763903 Sorghum bicolor
Sobic.008G082900 10.0kb upstream 10.0kb upstream 10000   false Chr08: 15748795-15758794 Sorghum bicolor
Sobic.008G082900 10.0kb downstream 10.0kb downstream 15109   true Chr08: 15758795-15773903 Sorghum bicolor
Sobic.008G082900 10.0kb downstream 10.0kb downstream 10000   false Chr08: 15763904-15773903 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122181807 5267 Panicoideae View MSA
124579105 5269 Grass View MSA
122049116 5273 Angiosperm View MSA
121311254 5274 Embryophyte View MSA
123425482 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.314        
cufflinks 0.1       Low
cufflinks 0.2        
cufflinks 0.542        
cufflinks 0.662        
cufflinks 2.258       High
cufflinks 0.29        
cufflinks 0.408        
cufflinks 0.589        
cufflinks 0.871       High
cufflinks 0.202        
cufflinks 0.222        
cufflinks 0.632        
cufflinks 0.167       Low
cufflinks 0.44        
cufflinks 0.647        
cufflinks 0.278        
cufflinks 0.426        
cufflinks 0.516        
cufflinks 0.331        
cufflinks 0.963       High
cufflinks 0.274        
cufflinks 0.184        
cufflinks 0.129       Low
cufflinks 0.315        
cufflinks 0.157       Low
cufflinks 0.181        
cufflinks 0.318        
cufflinks 0.848       High
cufflinks 0.687        

0 Strain