Gene : Sobic.008G080200 S. bicolor v3.1.1
Defline:  (1 of 3) PTHR24106//PTHR24106:SF146 - FAMILY NOT NAMED // RNI-LIKE SUPERFAMILY PROTEIN Genomic Order:  826
Name:  ? Sobic.008G080200 Secondary Identifier:  ? PAC:37927794
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

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Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.008G080200 0.5kb upstream 0.5kb upstream 6259   true Chr08: 13661236-13667494 Sorghum bicolor
Sobic.008G080200 0.5kb upstream 0.5kb upstream 500   false Chr08: 13666995-13667494 Sorghum bicolor
Sobic.008G080200 0.5kb downstream 0.5kb downstream 6259   true Chr08: 13660736-13666994 Sorghum bicolor
Sobic.008G080200 0.5kb downstream 0.5kb downstream 500   false Chr08: 13660736-13661235 Sorghum bicolor
Sobic.008G080200 1.0kb upstream 1.0kb upstream 6759   true Chr08: 13661236-13667994 Sorghum bicolor
Sobic.008G080200 1.0kb upstream 1.0kb upstream 1000   false Chr08: 13666995-13667994 Sorghum bicolor
Sobic.008G080200 1.0kb downstream 1.0kb downstream 6759   true Chr08: 13660236-13666994 Sorghum bicolor
Sobic.008G080200 1.0kb downstream 1.0kb downstream 1000   false Chr08: 13660236-13661235 Sorghum bicolor
Sobic.008G080200 2.0kb upstream 2.0kb upstream 7759   true Chr08: 13661236-13668994 Sorghum bicolor
Sobic.008G080200 2.0kb upstream 2.0kb upstream 2000   false Chr08: 13666995-13668994 Sorghum bicolor
Sobic.008G080200 2.0kb downstream 2.0kb downstream 7759   true Chr08: 13659236-13666994 Sorghum bicolor
Sobic.008G080200 2.0kb downstream 2.0kb downstream 2000   false Chr08: 13659236-13661235 Sorghum bicolor
Sobic.008G080200 5.0kb upstream 5.0kb upstream 10759   true Chr08: 13661236-13671994 Sorghum bicolor
Sobic.008G080200 5.0kb upstream 5.0kb upstream 5000   false Chr08: 13666995-13671994 Sorghum bicolor
Sobic.008G080200 5.0kb downstream 5.0kb downstream 10759   true Chr08: 13656236-13666994 Sorghum bicolor
Sobic.008G080200 5.0kb downstream 5.0kb downstream 5000   false Chr08: 13656236-13661235 Sorghum bicolor
Sobic.008G080200 10.0kb upstream 10.0kb upstream 15759   true Chr08: 13661236-13676994 Sorghum bicolor
Sobic.008G080200 10.0kb upstream 10.0kb upstream 10000   false Chr08: 13666995-13676994 Sorghum bicolor
Sobic.008G080200 10.0kb downstream 10.0kb downstream 15759   true Chr08: 13651236-13666994 Sorghum bicolor
Sobic.008G080200 10.0kb downstream 10.0kb downstream 10000   false Chr08: 13651236-13661235 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122187264 5267 Panicoideae View MSA
124576846 5269 Grass View MSA
122043021 5273 Angiosperm View MSA
121348154 5274 Embryophyte View MSA
123380748 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.954        
cufflinks 0.456       Low
cufflinks 1.309        
cufflinks 0.822        
cufflinks 2.764       High
cufflinks 0.864        
cufflinks 0.879        
cufflinks 0.948        
cufflinks 1.08        
cufflinks 0.995        
cufflinks 0.708        
cufflinks 0.757        
cufflinks 1.222        
cufflinks 0.721        
cufflinks 0.954        
cufflinks 1.481       High
cufflinks 0.787        
cufflinks 0.848        
cufflinks 0.993        
cufflinks 0.733        
cufflinks 1.809       High
cufflinks 0.762        
cufflinks 0.852        
cufflinks 0.828        
cufflinks 0.766        
cufflinks 0.638       Low
cufflinks 0.834        
cufflinks 0.989        
cufflinks 0.786        
cufflinks 1.038        

0 Strain