Gene : Sobic.008G081500 S. bicolor v3.1.1
Defline:  (1 of 3) PTHR11654//PTHR11654:SF21 - OLIGOPEPTIDE TRANSPORTER-RELATED // SUBFAMILY NOT NAMED Genomic Order:  840
Name:  ? Sobic.008G081500 Secondary Identifier:  ? PAC:37927308
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.008G081500 0.5kb upstream 0.5kb upstream 5381   true Chr08: 14583078-14588458 Sorghum bicolor
Sobic.008G081500 0.5kb upstream 0.5kb upstream 500   false Chr08: 14583078-14583577 Sorghum bicolor
Sobic.008G081500 0.5kb downstream 0.5kb downstream 5381   true Chr08: 14583578-14588958 Sorghum bicolor
Sobic.008G081500 0.5kb downstream 0.5kb downstream 500   false Chr08: 14588459-14588958 Sorghum bicolor
Sobic.008G081500 1.0kb upstream 1.0kb upstream 5881   true Chr08: 14582578-14588458 Sorghum bicolor
Sobic.008G081500 1.0kb upstream 1.0kb upstream 1000   false Chr08: 14582578-14583577 Sorghum bicolor
Sobic.008G081500 1.0kb downstream 1.0kb downstream 5881   true Chr08: 14583578-14589458 Sorghum bicolor
Sobic.008G081500 1.0kb downstream 1.0kb downstream 1000   false Chr08: 14588459-14589458 Sorghum bicolor
Sobic.008G081500 2.0kb upstream 2.0kb upstream 6881   true Chr08: 14581578-14588458 Sorghum bicolor
Sobic.008G081500 2.0kb upstream 2.0kb upstream 2000   false Chr08: 14581578-14583577 Sorghum bicolor
Sobic.008G081500 2.0kb downstream 2.0kb downstream 6881   true Chr08: 14583578-14590458 Sorghum bicolor
Sobic.008G081500 2.0kb downstream 2.0kb downstream 2000   false Chr08: 14588459-14590458 Sorghum bicolor
Sobic.008G081500 5.0kb upstream 5.0kb upstream 9881   true Chr08: 14578578-14588458 Sorghum bicolor
Sobic.008G081500 5.0kb upstream 5.0kb upstream 5000   false Chr08: 14578578-14583577 Sorghum bicolor
Sobic.008G081500 5.0kb downstream 5.0kb downstream 9881   true Chr08: 14583578-14593458 Sorghum bicolor
Sobic.008G081500 5.0kb downstream 5.0kb downstream 5000   false Chr08: 14588459-14593458 Sorghum bicolor
Sobic.008G081500 10.0kb upstream 10.0kb upstream 14881   true Chr08: 14573578-14588458 Sorghum bicolor
Sobic.008G081500 10.0kb upstream 10.0kb upstream 10000   false Chr08: 14573578-14583577 Sorghum bicolor
Sobic.008G081500 10.0kb downstream 10.0kb downstream 14881   true Chr08: 14583578-14598458 Sorghum bicolor
Sobic.008G081500 10.0kb downstream 10.0kb downstream 10000   false Chr08: 14588459-14598458 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121893410 5273 Angiosperm View MSA
122173613 5267 Panicoideae View MSA
124464299 5269 Grass View MSA
121164012 5274 Embryophyte View MSA
123203005 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.008     Low  
cufflinks 0.027     Low  
cufflinks 1.929       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.189        
cufflinks 0.13        
cufflinks 0.003     Low Low
cufflinks 0.257        
cufflinks 1.465       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.118        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.032     Low  
cufflinks 0.186        
cufflinks 0.081     Low  
cufflinks 0.005     Low  
cufflinks 3.009       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.016     Low  
cufflinks 0.009     Low  
cufflinks 0.054        
cufflinks 0.027     Low  
cufflinks 0.021     Low  
cufflinks 0.014     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain