Gene : Sobic.008G076800 S. bicolor v3.1.1
Defline:  (1 of 5) PTHR14379 - LIMKAIN B LKAP Genomic Order:  788
Name:  ? Sobic.008G076800 Secondary Identifier:  ? PAC:37926483
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.008G076800 0.5kb upstream 0.5kb upstream 6254   true Chr08: 11562961-11569214 Sorghum bicolor
Sobic.008G076800 0.5kb upstream 0.5kb upstream 500   false Chr08: 11568715-11569214 Sorghum bicolor
Sobic.008G076800 0.5kb downstream 0.5kb downstream 6254   true Chr08: 11562461-11568714 Sorghum bicolor
Sobic.008G076800 0.5kb downstream 0.5kb downstream 500   false Chr08: 11562461-11562960 Sorghum bicolor
Sobic.008G076800 1.0kb upstream 1.0kb upstream 6754   true Chr08: 11562961-11569714 Sorghum bicolor
Sobic.008G076800 1.0kb upstream 1.0kb upstream 1000   false Chr08: 11568715-11569714 Sorghum bicolor
Sobic.008G076800 1.0kb downstream 1.0kb downstream 6754   true Chr08: 11561961-11568714 Sorghum bicolor
Sobic.008G076800 1.0kb downstream 1.0kb downstream 1000   false Chr08: 11561961-11562960 Sorghum bicolor
Sobic.008G076800 2.0kb upstream 2.0kb upstream 7754   true Chr08: 11562961-11570714 Sorghum bicolor
Sobic.008G076800 2.0kb upstream 2.0kb upstream 2000   false Chr08: 11568715-11570714 Sorghum bicolor
Sobic.008G076800 2.0kb downstream 2.0kb downstream 7754   true Chr08: 11560961-11568714 Sorghum bicolor
Sobic.008G076800 2.0kb downstream 2.0kb downstream 2000   false Chr08: 11560961-11562960 Sorghum bicolor
Sobic.008G076800 5.0kb upstream 5.0kb upstream 10754   true Chr08: 11562961-11573714 Sorghum bicolor
Sobic.008G076800 5.0kb upstream 5.0kb upstream 5000   false Chr08: 11568715-11573714 Sorghum bicolor
Sobic.008G076800 5.0kb downstream 5.0kb downstream 10754   true Chr08: 11557961-11568714 Sorghum bicolor
Sobic.008G076800 5.0kb downstream 5.0kb downstream 5000   false Chr08: 11557961-11562960 Sorghum bicolor
Sobic.008G076800 10.0kb upstream 10.0kb upstream 15754   true Chr08: 11562961-11578714 Sorghum bicolor
Sobic.008G076800 10.0kb upstream 10.0kb upstream 10000   false Chr08: 11568715-11578714 Sorghum bicolor
Sobic.008G076800 10.0kb downstream 10.0kb downstream 15754   true Chr08: 11552961-11568714 Sorghum bicolor
Sobic.008G076800 10.0kb downstream 10.0kb downstream 10000   false Chr08: 11552961-11562960 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122196676 5267 Panicoideae View MSA
124581421 5269 Grass View MSA
122044167 5273 Angiosperm View MSA
121346389 5274 Embryophyte View MSA
123380376 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.01       High
cufflinks 0.528        
cufflinks 0.669        
cufflinks 0.694        
cufflinks 0.555        
cufflinks 0.595        
cufflinks 0.58        
cufflinks 0.517       Low
cufflinks 0.808        
cufflinks 0.972       High
cufflinks 0.733        
cufflinks 0.99       High
cufflinks 0.524       Low
cufflinks 0.827        
cufflinks 0.822        
cufflinks 0.85        
cufflinks 0.647        
cufflinks 0.557        
cufflinks 0.618        
cufflinks 0.843        
cufflinks 0.992       High
cufflinks 0.782        
cufflinks 0.849        
cufflinks 0.796        
cufflinks 0.825        
cufflinks 0.542        
cufflinks 0.635        
cufflinks 0.84        
cufflinks 0.47       Low
cufflinks 0.783        

0 Strain