Gene : Sobic.008G057000 S. bicolor v3.1.1
Defline:  (1 of 2) PTHR12802:SF41 - BRAHMA ASSOCIATED PROTEIN 155 KDA Genomic Order:  584
Name:  ? Sobic.008G057000 Secondary Identifier:  ? PAC:37927596
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.008G057000 0.5kb upstream 0.5kb upstream 7962   true Chr08: 5902361-5910322 Sorghum bicolor
Sobic.008G057000 0.5kb upstream 0.5kb upstream 500   false Chr08: 5902361-5902860 Sorghum bicolor
Sobic.008G057000 0.5kb downstream 0.5kb downstream 7962   true Chr08: 5902861-5910822 Sorghum bicolor
Sobic.008G057000 0.5kb downstream 0.5kb downstream 500   false Chr08: 5910323-5910822 Sorghum bicolor
Sobic.008G057000 1.0kb upstream 1.0kb upstream 8462   true Chr08: 5901861-5910322 Sorghum bicolor
Sobic.008G057000 1.0kb upstream 1.0kb upstream 1000   false Chr08: 5901861-5902860 Sorghum bicolor
Sobic.008G057000 1.0kb downstream 1.0kb downstream 8462   true Chr08: 5902861-5911322 Sorghum bicolor
Sobic.008G057000 1.0kb downstream 1.0kb downstream 1000   false Chr08: 5910323-5911322 Sorghum bicolor
Sobic.008G057000 2.0kb upstream 2.0kb upstream 9462   true Chr08: 5900861-5910322 Sorghum bicolor
Sobic.008G057000 2.0kb upstream 2.0kb upstream 2000   false Chr08: 5900861-5902860 Sorghum bicolor
Sobic.008G057000 2.0kb downstream 2.0kb downstream 9462   true Chr08: 5902861-5912322 Sorghum bicolor
Sobic.008G057000 2.0kb downstream 2.0kb downstream 2000   false Chr08: 5910323-5912322 Sorghum bicolor
Sobic.008G057000 5.0kb upstream 5.0kb upstream 12462   true Chr08: 5897861-5910322 Sorghum bicolor
Sobic.008G057000 5.0kb upstream 5.0kb upstream 5000   false Chr08: 5897861-5902860 Sorghum bicolor
Sobic.008G057000 5.0kb downstream 5.0kb downstream 12462   true Chr08: 5902861-5915322 Sorghum bicolor
Sobic.008G057000 5.0kb downstream 5.0kb downstream 5000   false Chr08: 5910323-5915322 Sorghum bicolor
Sobic.008G057000 10.0kb upstream 10.0kb upstream 17462   true Chr08: 5892861-5910322 Sorghum bicolor
Sobic.008G057000 10.0kb upstream 10.0kb upstream 10000   false Chr08: 5892861-5902860 Sorghum bicolor
Sobic.008G057000 10.0kb downstream 10.0kb downstream 17462   true Chr08: 5902861-5920322 Sorghum bicolor
Sobic.008G057000 10.0kb downstream 10.0kb downstream 10000   false Chr08: 5910323-5920322 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122183249 5267 Panicoideae View MSA
124583035 5269 Grass View MSA
122042836 5273 Angiosperm View MSA
121349137 5274 Embryophyte View MSA
123428437 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.664        
cufflinks 0.444       Low
cufflinks 0.625       Low
cufflinks 0.986        
cufflinks 2.479       High
cufflinks 1.651        
cufflinks 1.354        
cufflinks 0.546       Low
cufflinks 2.253       High
cufflinks 2.094       High
cufflinks 1.192        
cufflinks 1.605        
cufflinks 1.841        
cufflinks 1.194        
cufflinks 1.605        
cufflinks 0.669       Low
cufflinks 1.361        
cufflinks 1.345        
cufflinks 0.845        
cufflinks 1.58        
cufflinks 3.689       High
cufflinks 1.25        
cufflinks 1.361        
cufflinks 1.405        
cufflinks 0.777       Low
cufflinks 0.394       Low
cufflinks 1.239        
cufflinks 1.428        
cufflinks 0.958        
cufflinks 2.353       High

0 Strain