Gene : 29912.t000103 R. communis v0.1
Defline:  (1 of 1) 5.5.1.18 - Lycopene epsilon-cyclase Genomic Order:  77
Name:  ? 29912.t000103 Secondary Identifier:  ? PAC:16813254
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Rcommunis CAROTENOID-PWY Ricinus communis pathologic  
Rcommunis PWY-5175 Ricinus communis pathologic  
Rcommunis PWY-5946 Ricinus communis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
29912.t000103 0.5kb upstream 0.5kb upstream 3855 true 29912: 533486-537340 Ricinus communis
29912.t000103 0.5kb upstream 0.5kb upstream 500 false 29912: 533486-533985 Ricinus communis
29912.t000103 0.5kb downstream 0.5kb downstream 3855 true 29912: 533986-537840 Ricinus communis
29912.t000103 0.5kb downstream 0.5kb downstream 500 false 29912: 537341-537840 Ricinus communis
29912.t000103 1.0kb upstream 1.0kb upstream 4355 true 29912: 532986-537340 Ricinus communis
29912.t000103 1.0kb upstream 1.0kb upstream 1000 false 29912: 532986-533985 Ricinus communis
29912.t000103 1.0kb downstream 1.0kb downstream 4355 true 29912: 533986-538340 Ricinus communis
29912.t000103 1.0kb downstream 1.0kb downstream 1000 false 29912: 537341-538340 Ricinus communis
29912.t000103 2.0kb upstream 2.0kb upstream 5355 true 29912: 531986-537340 Ricinus communis
29912.t000103 2.0kb upstream 2.0kb upstream 2000 false 29912: 531986-533985 Ricinus communis
29912.t000103 2.0kb downstream 2.0kb downstream 5355 true 29912: 533986-539340 Ricinus communis
29912.t000103 2.0kb downstream 2.0kb downstream 2000 false 29912: 537341-539340 Ricinus communis
29912.t000103 5.0kb upstream 5.0kb upstream 8355 true 29912: 528986-537340 Ricinus communis
29912.t000103 5.0kb upstream 5.0kb upstream 5000 false 29912: 528986-533985 Ricinus communis
29912.t000103 5.0kb downstream 5.0kb downstream 8355 true 29912: 533986-542340 Ricinus communis
29912.t000103 5.0kb downstream 5.0kb downstream 5000 false 29912: 537341-542340 Ricinus communis
29912.t000103 10.0kb upstream 10.0kb upstream 13355 true 29912: 523986-537340 Ricinus communis
29912.t000103 10.0kb upstream 10.0kb upstream 10000 false 29912: 523986-533985 Ricinus communis
29912.t000103 10.0kb downstream 10.0kb downstream 13355 true 29912: 533986-547340 Ricinus communis
29912.t000103 10.0kb downstream 10.0kb downstream 10000 false 29912: 537341-547340 Ricinus communis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122458416 5262 Malpighiales View MSA
124243060 5268 Malvidae View MSA
124068333 5270 Rosid View MSA
123739919 5271 Pentapetalae View MSA
122791667 5272 Eudicot View MSA
122041543 5273 Angiosperm View MSA
121345455 5274 Embryophyte View MSA
123424108 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain