Gene : 29912.t000144 R. communis v0.1
Defline:  (1 of 2) PTHR22594:SF34 - ASPARAGINE--TRNA LIGASE, MITOCHONDRIAL-RELATED Genomic Order:  117
Name:  ? 29912.t000144 Secondary Identifier:  ? PAC:16813295
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Rcommunis TRNA-CHARGING-PWY Ricinus communis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
29912.t000144 0.5kb upstream 0.5kb upstream 968 true 29912: 725684-726651 Ricinus communis
29912.t000144 0.5kb upstream 0.5kb upstream 500 false 29912: 726152-726651 Ricinus communis
29912.t000144 0.5kb downstream 0.5kb downstream 968 true 29912: 725184-726151 Ricinus communis
29912.t000144 0.5kb downstream 0.5kb downstream 500 false 29912: 725184-725683 Ricinus communis
29912.t000144 1.0kb upstream 1.0kb upstream 1468 true 29912: 725684-727151 Ricinus communis
29912.t000144 1.0kb upstream 1.0kb upstream 1000 false 29912: 726152-727151 Ricinus communis
29912.t000144 1.0kb downstream 1.0kb downstream 1468 true 29912: 724684-726151 Ricinus communis
29912.t000144 1.0kb downstream 1.0kb downstream 1000 false 29912: 724684-725683 Ricinus communis
29912.t000144 2.0kb upstream 2.0kb upstream 2468 true 29912: 725684-728151 Ricinus communis
29912.t000144 2.0kb upstream 2.0kb upstream 2000 false 29912: 726152-728151 Ricinus communis
29912.t000144 2.0kb downstream 2.0kb downstream 2468 true 29912: 723684-726151 Ricinus communis
29912.t000144 2.0kb downstream 2.0kb downstream 2000 false 29912: 723684-725683 Ricinus communis
29912.t000144 5.0kb upstream 5.0kb upstream 5468 true 29912: 725684-731151 Ricinus communis
29912.t000144 5.0kb upstream 5.0kb upstream 5000 false 29912: 726152-731151 Ricinus communis
29912.t000144 5.0kb downstream 5.0kb downstream 5468 true 29912: 720684-726151 Ricinus communis
29912.t000144 5.0kb downstream 5.0kb downstream 5000 false 29912: 720684-725683 Ricinus communis
29912.t000144 10.0kb upstream 10.0kb upstream 10468 true 29912: 725684-736151 Ricinus communis
29912.t000144 10.0kb upstream 10.0kb upstream 10000 false 29912: 726152-736151 Ricinus communis
29912.t000144 10.0kb downstream 10.0kb downstream 10468 true 29912: 715684-726151 Ricinus communis
29912.t000144 10.0kb downstream 10.0kb downstream 10000 false 29912: 715684-725683 Ricinus communis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121691264 5273 Angiosperm View MSA
122440295 5262 Malpighiales Singleton cluster - no MSA
124228548 5268 Malvidae Singleton cluster - no MSA
123944482 5270 Rosid Singleton cluster - no MSA
123647107 5271 Pentapetalae View MSA
122681112 5272 Eudicot View MSA
120963125 5274 Embryophyte View MSA
123003483 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain