Gene : 29941.t000007 R. communis v0.1
Defline:  (1 of 1) K06443 - lycopene beta-cyclase (lcyB, crtL1, crtY) Genomic Order:  7
Name:  ? 29941.t000007 Secondary Identifier:  ? PAC:16814280
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Rcommunis CAROTENOID-PWY Ricinus communis pathologic  
Rcommunis PWY-5943 Ricinus communis pathologic  
Rcommunis PWY-5947 Ricinus communis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
29941.t000007 0.5kb upstream 0.5kb upstream 2653 true 29941: 65556-68208 Ricinus communis
29941.t000007 0.5kb upstream 0.5kb upstream 500 false 29941: 67709-68208 Ricinus communis
29941.t000007 0.5kb downstream 0.5kb downstream 2653 true 29941: 65056-67708 Ricinus communis
29941.t000007 0.5kb downstream 0.5kb downstream 500 false 29941: 65056-65555 Ricinus communis
29941.t000007 1.0kb upstream 1.0kb upstream 3153 true 29941: 65556-68708 Ricinus communis
29941.t000007 1.0kb upstream 1.0kb upstream 1000 false 29941: 67709-68708 Ricinus communis
29941.t000007 1.0kb downstream 1.0kb downstream 3153 true 29941: 64556-67708 Ricinus communis
29941.t000007 1.0kb downstream 1.0kb downstream 1000 false 29941: 64556-65555 Ricinus communis
29941.t000007 2.0kb upstream 2.0kb upstream 4153 true 29941: 65556-69708 Ricinus communis
29941.t000007 2.0kb upstream 2.0kb upstream 2000 false 29941: 67709-69708 Ricinus communis
29941.t000007 2.0kb downstream 2.0kb downstream 4153 true 29941: 63556-67708 Ricinus communis
29941.t000007 2.0kb downstream 2.0kb downstream 2000 false 29941: 63556-65555 Ricinus communis
29941.t000007 5.0kb upstream 5.0kb upstream 7153 true 29941: 65556-72708 Ricinus communis
29941.t000007 5.0kb upstream 5.0kb upstream 5000 false 29941: 67709-72708 Ricinus communis
29941.t000007 5.0kb downstream 5.0kb downstream 7153 true 29941: 60556-67708 Ricinus communis
29941.t000007 5.0kb downstream 5.0kb downstream 5000 false 29941: 60556-65555 Ricinus communis
29941.t000007 10.0kb upstream 10.0kb upstream 12153 true 29941: 65556-77708 Ricinus communis
29941.t000007 10.0kb upstream 10.0kb upstream 10000 false 29941: 67709-77708 Ricinus communis
29941.t000007 10.0kb downstream 10.0kb downstream 12153 true 29941: 55556-67708 Ricinus communis
29941.t000007 10.0kb downstream 10.0kb downstream 10000 false 29941: 55556-65555 Ricinus communis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122449867 5262 Malpighiales View MSA
124240984 5268 Malvidae View MSA
124065821 5270 Rosid View MSA
123737595 5271 Pentapetalae View MSA
122786885 5272 Eudicot View MSA
122046204 5273 Angiosperm View MSA
121345644 5274 Embryophyte View MSA
123423874 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain