Gene : 29957.t000017 R. communis v0.1
Defline:  (1 of 8) K02703 - photosystem II P680 reaction center D1 protein (psbA) Genomic Order:  16
Name:  ? 29957.t000017 Secondary Identifier:  ? PAC:16814535
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Rcommunis PHOTOALL-PWY Ricinus communis pathologic  
Rcommunis PWY-101 Ricinus communis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
29957.t000017 0.5kb upstream 0.5kb upstream 1117 true 29957: 374882-375998 Ricinus communis
29957.t000017 0.5kb upstream 0.5kb upstream 500 false 29957: 375499-375998 Ricinus communis
29957.t000017 0.5kb downstream 0.5kb downstream 1117 true 29957: 374382-375498 Ricinus communis
29957.t000017 0.5kb downstream 0.5kb downstream 500 false 29957: 374382-374881 Ricinus communis
29957.t000017 1.0kb upstream 1.0kb upstream 1617 true 29957: 374882-376498 Ricinus communis
29957.t000017 1.0kb upstream 1.0kb upstream 1000 false 29957: 375499-376498 Ricinus communis
29957.t000017 1.0kb downstream 1.0kb downstream 1617 true 29957: 373882-375498 Ricinus communis
29957.t000017 1.0kb downstream 1.0kb downstream 1000 false 29957: 373882-374881 Ricinus communis
29957.t000017 2.0kb upstream 2.0kb upstream 2617 true 29957: 374882-377498 Ricinus communis
29957.t000017 2.0kb upstream 2.0kb upstream 2000 false 29957: 375499-377498 Ricinus communis
29957.t000017 2.0kb downstream 2.0kb downstream 2617 true 29957: 372882-375498 Ricinus communis
29957.t000017 2.0kb downstream 2.0kb downstream 2000 false 29957: 372882-374881 Ricinus communis
29957.t000017 5.0kb upstream 5.0kb upstream 5617 true 29957: 374882-380498 Ricinus communis
29957.t000017 5.0kb upstream 5.0kb upstream 5000 false 29957: 375499-380498 Ricinus communis
29957.t000017 5.0kb downstream 5.0kb downstream 5617 true 29957: 369882-375498 Ricinus communis
29957.t000017 5.0kb downstream 5.0kb downstream 5000 false 29957: 369882-374881 Ricinus communis
29957.t000017 10.0kb upstream 10.0kb upstream 10617 true 29957: 374882-385498 Ricinus communis
29957.t000017 10.0kb upstream 10.0kb upstream 10000 false 29957: 375499-385498 Ricinus communis
29957.t000017 10.0kb downstream 10.0kb downstream 10617 true 29957: 364882-375498 Ricinus communis
29957.t000017 10.0kb downstream 10.0kb downstream 10000 false 29957: 364882-374881 Ricinus communis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122440639 5262 Malpighiales Singleton cluster - no MSA
124254203 5268 Malvidae View MSA
124074892 5270 Rosid View MSA
123753442 5271 Pentapetalae View MSA
122794783 5272 Eudicot View MSA
122047558 5273 Angiosperm View MSA
121350331 5274 Embryophyte View MSA
123381681 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain