Gene : 29969.t000013 R. communis v0.1
Defline:  (1 of 7) 2.3.1.133 - Shikimate O-hydroxycinnamoyltransferase Genomic Order:  12
Name:  ? 29969.t000013 Secondary Identifier:  ? PAC:16814662
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Rcommunis PWY-361 Ricinus communis pathologic  
Rcommunis PWY-6040 Ricinus communis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
29969.t000013 0.5kb upstream 0.5kb upstream 1939 true 29969: 138887-140825 Ricinus communis
29969.t000013 0.5kb upstream 0.5kb upstream 500 false 29969: 140326-140825 Ricinus communis
29969.t000013 0.5kb downstream 0.5kb downstream 1939 true 29969: 138387-140325 Ricinus communis
29969.t000013 0.5kb downstream 0.5kb downstream 500 false 29969: 138387-138886 Ricinus communis
29969.t000013 1.0kb upstream 1.0kb upstream 2439 true 29969: 138887-141325 Ricinus communis
29969.t000013 1.0kb upstream 1.0kb upstream 1000 false 29969: 140326-141325 Ricinus communis
29969.t000013 1.0kb downstream 1.0kb downstream 2439 true 29969: 137887-140325 Ricinus communis
29969.t000013 1.0kb downstream 1.0kb downstream 1000 false 29969: 137887-138886 Ricinus communis
29969.t000013 2.0kb upstream 2.0kb upstream 3439 true 29969: 138887-142325 Ricinus communis
29969.t000013 2.0kb upstream 2.0kb upstream 2000 false 29969: 140326-142325 Ricinus communis
29969.t000013 2.0kb downstream 2.0kb downstream 3439 true 29969: 136887-140325 Ricinus communis
29969.t000013 2.0kb downstream 2.0kb downstream 2000 false 29969: 136887-138886 Ricinus communis
29969.t000013 5.0kb upstream 5.0kb upstream 6439 true 29969: 138887-145325 Ricinus communis
29969.t000013 5.0kb upstream 5.0kb upstream 5000 false 29969: 140326-145325 Ricinus communis
29969.t000013 5.0kb downstream 5.0kb downstream 6439 true 29969: 133887-140325 Ricinus communis
29969.t000013 5.0kb downstream 5.0kb downstream 5000 false 29969: 133887-138886 Ricinus communis
29969.t000013 10.0kb upstream 10.0kb upstream 11439 true 29969: 138887-150325 Ricinus communis
29969.t000013 10.0kb upstream 10.0kb upstream 10000 false 29969: 140326-150325 Ricinus communis
29969.t000013 10.0kb downstream 10.0kb downstream 11439 true 29969: 128887-140325 Ricinus communis
29969.t000013 10.0kb downstream 10.0kb downstream 10000 false 29969: 128887-138886 Ricinus communis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122426596 5262 Malpighiales View MSA
124241469 5268 Malvidae View MSA
124064674 5270 Rosid View MSA
123740627 5271 Pentapetalae View MSA
122795284 5272 Eudicot View MSA
122051643 5273 Angiosperm View MSA
121350983 5274 Embryophyte View MSA
123428782 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain