Gene : 30042.t000005 R. communis v0.1
Defline:  (1 of 6) K01184 - polygalacturonase (E3.2.1.15) Genomic Order:  5
Name:  ? 30042.t000005 Secondary Identifier:  ? PAC:16816039
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Rcommunis PWY-1081 Ricinus communis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
30042.t000005 0.5kb upstream 0.5kb upstream 2246 true 30042: 31662-33907 Ricinus communis
30042.t000005 0.5kb upstream 0.5kb upstream 500 false 30042: 33408-33907 Ricinus communis
30042.t000005 0.5kb downstream 0.5kb downstream 2246 true 30042: 31162-33407 Ricinus communis
30042.t000005 0.5kb downstream 0.5kb downstream 500 false 30042: 31162-31661 Ricinus communis
30042.t000005 1.0kb upstream 1.0kb upstream 2746 true 30042: 31662-34407 Ricinus communis
30042.t000005 1.0kb upstream 1.0kb upstream 1000 false 30042: 33408-34407 Ricinus communis
30042.t000005 1.0kb downstream 1.0kb downstream 2746 true 30042: 30662-33407 Ricinus communis
30042.t000005 1.0kb downstream 1.0kb downstream 1000 false 30042: 30662-31661 Ricinus communis
30042.t000005 2.0kb upstream 2.0kb upstream 3746 true 30042: 31662-35407 Ricinus communis
30042.t000005 2.0kb upstream 2.0kb upstream 2000 false 30042: 33408-35407 Ricinus communis
30042.t000005 2.0kb downstream 2.0kb downstream 3746 true 30042: 29662-33407 Ricinus communis
30042.t000005 2.0kb downstream 2.0kb downstream 2000 false 30042: 29662-31661 Ricinus communis
30042.t000005 5.0kb upstream 5.0kb upstream 6746 true 30042: 31662-38407 Ricinus communis
30042.t000005 5.0kb upstream 5.0kb upstream 5000 false 30042: 33408-38407 Ricinus communis
30042.t000005 5.0kb downstream 5.0kb downstream 6746 true 30042: 26662-33407 Ricinus communis
30042.t000005 5.0kb downstream 5.0kb downstream 5000 false 30042: 26662-31661 Ricinus communis
30042.t000005 10.0kb upstream 10.0kb upstream 11746 true 30042: 31662-43407 Ricinus communis
30042.t000005 10.0kb upstream 10.0kb upstream 10000 false 30042: 33408-43407 Ricinus communis
30042.t000005 10.0kb downstream 10.0kb downstream 11746 true 30042: 21662-33407 Ricinus communis
30042.t000005 10.0kb downstream 10.0kb downstream 10000 false 30042: 21662-31661 Ricinus communis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122449604 5262 Malpighiales View MSA
124255183 5268 Malvidae View MSA
123953106 5270 Rosid View MSA
123758331 5271 Pentapetalae View MSA
122779296 5272 Eudicot View MSA
122051291 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain