Gene : 30042.t000008 R. communis v0.1
Defline:  (1 of 6) K01184 - polygalacturonase (E3.2.1.15) Genomic Order:  8
Name:  ? 30042.t000008 Secondary Identifier:  ? PAC:16816042
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Rcommunis PWY-1081 Ricinus communis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
30042.t000008 0.5kb upstream 0.5kb upstream 1958 true 30042: 77700-79657 Ricinus communis
30042.t000008 0.5kb upstream 0.5kb upstream 500 false 30042: 77700-78199 Ricinus communis
30042.t000008 0.5kb downstream 0.5kb downstream 1958 true 30042: 78200-80157 Ricinus communis
30042.t000008 0.5kb downstream 0.5kb downstream 500 false 30042: 79658-80157 Ricinus communis
30042.t000008 1.0kb upstream 1.0kb upstream 2458 true 30042: 77200-79657 Ricinus communis
30042.t000008 1.0kb upstream 1.0kb upstream 1000 false 30042: 77200-78199 Ricinus communis
30042.t000008 1.0kb downstream 1.0kb downstream 2458 true 30042: 78200-80657 Ricinus communis
30042.t000008 1.0kb downstream 1.0kb downstream 1000 false 30042: 79658-80657 Ricinus communis
30042.t000008 2.0kb upstream 2.0kb upstream 3458 true 30042: 76200-79657 Ricinus communis
30042.t000008 2.0kb upstream 2.0kb upstream 2000 false 30042: 76200-78199 Ricinus communis
30042.t000008 2.0kb downstream 2.0kb downstream 3458 true 30042: 78200-81657 Ricinus communis
30042.t000008 2.0kb downstream 2.0kb downstream 2000 false 30042: 79658-81657 Ricinus communis
30042.t000008 5.0kb upstream 5.0kb upstream 6458 true 30042: 73200-79657 Ricinus communis
30042.t000008 5.0kb upstream 5.0kb upstream 5000 false 30042: 73200-78199 Ricinus communis
30042.t000008 5.0kb downstream 5.0kb downstream 6458 true 30042: 78200-84657 Ricinus communis
30042.t000008 5.0kb downstream 5.0kb downstream 5000 false 30042: 79658-84657 Ricinus communis
30042.t000008 10.0kb upstream 10.0kb upstream 11458 true 30042: 68200-79657 Ricinus communis
30042.t000008 10.0kb upstream 10.0kb upstream 10000 false 30042: 68200-78199 Ricinus communis
30042.t000008 10.0kb downstream 10.0kb downstream 11458 true 30042: 78200-89657 Ricinus communis
30042.t000008 10.0kb downstream 10.0kb downstream 10000 false 30042: 79658-89657 Ricinus communis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122448227 5262 Malpighiales View MSA
124252972 5268 Malvidae View MSA
124060937 5270 Rosid View MSA
123747300 5271 Pentapetalae View MSA
122794998 5272 Eudicot View MSA
122051291 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain