Gene : VIT_203s0038g03440 V. vinifera v2.1
Defline:  (1 of 1) PTHR11777:SF14 - ALANINE--TRNA LIGASE, CHLOROPLASTIC-RELATED Genomic Order:  292
Name:  ? VIT_203s0038g03440 Secondary Identifier:  ? PAC:38035021
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Vvinifera TRNA-CHARGING-PWY Vitis vinifera pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
VIT_203s0038g03440 0.5kb upstream 0.5kb upstream 8687 true chr3: 2491906-2500592 Vitis vinifera
VIT_203s0038g03440 0.5kb upstream 0.5kb upstream 500 false chr3: 2500093-2500592 Vitis vinifera
VIT_203s0038g03440 0.5kb downstream 0.5kb downstream 8687 true chr3: 2491406-2500092 Vitis vinifera
VIT_203s0038g03440 0.5kb downstream 0.5kb downstream 500 false chr3: 2491406-2491905 Vitis vinifera
VIT_203s0038g03440 1.0kb upstream 1.0kb upstream 9187 true chr3: 2491906-2501092 Vitis vinifera
VIT_203s0038g03440 1.0kb upstream 1.0kb upstream 1000 false chr3: 2500093-2501092 Vitis vinifera
VIT_203s0038g03440 1.0kb downstream 1.0kb downstream 9187 true chr3: 2490906-2500092 Vitis vinifera
VIT_203s0038g03440 1.0kb downstream 1.0kb downstream 1000 false chr3: 2490906-2491905 Vitis vinifera
VIT_203s0038g03440 2.0kb upstream 2.0kb upstream 10187 true chr3: 2491906-2502092 Vitis vinifera
VIT_203s0038g03440 2.0kb upstream 2.0kb upstream 2000 false chr3: 2500093-2502092 Vitis vinifera
VIT_203s0038g03440 2.0kb downstream 2.0kb downstream 10187 true chr3: 2489906-2500092 Vitis vinifera
VIT_203s0038g03440 2.0kb downstream 2.0kb downstream 2000 false chr3: 2489906-2491905 Vitis vinifera
VIT_203s0038g03440 5.0kb upstream 5.0kb upstream 13187 true chr3: 2491906-2505092 Vitis vinifera
VIT_203s0038g03440 5.0kb upstream 5.0kb upstream 5000 false chr3: 2500093-2505092 Vitis vinifera
VIT_203s0038g03440 5.0kb downstream 5.0kb downstream 13187 true chr3: 2486906-2500092 Vitis vinifera
VIT_203s0038g03440 5.0kb downstream 5.0kb downstream 5000 false chr3: 2486906-2491905 Vitis vinifera
VIT_203s0038g03440 10.0kb upstream 10.0kb upstream 18187 true chr3: 2491906-2510092 Vitis vinifera
VIT_203s0038g03440 10.0kb upstream 10.0kb upstream 10000 false chr3: 2500093-2510092 Vitis vinifera
VIT_203s0038g03440 10.0kb downstream 10.0kb downstream 18187 true chr3: 2481906-2500092 Vitis vinifera
VIT_203s0038g03440 10.0kb downstream 10.0kb downstream 10000 false chr3: 2481906-2491905 Vitis vinifera

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124064161 5270 Rosid View MSA
123740814 5271 Pentapetalae View MSA
122788872 5272 Eudicot View MSA
122048095 5273 Angiosperm View MSA
121348703 5274 Embryophyte View MSA
123425032 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain