Gene : VIT_203s0038g01460 V. vinifera v2.1
Defline:  (1 of 2) PTHR11877//PTHR11877:SF25 - HYDROXYMETHYLGLUTARYL-COA SYNTHASE // SUBFAMILY NOT NAMED Genomic Order:  114
Name:  ? VIT_203s0038g01460 Secondary Identifier:  ? PAC:38034394
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
VIT_203s0038g01460 0.5kb upstream 0.5kb upstream 2117 true chr3: 1005820-1007936 Vitis vinifera
VIT_203s0038g01460 0.5kb upstream 0.5kb upstream 500 false chr3: 1005820-1006319 Vitis vinifera
VIT_203s0038g01460 0.5kb downstream 0.5kb downstream 2117 true chr3: 1006320-1008436 Vitis vinifera
VIT_203s0038g01460 0.5kb downstream 0.5kb downstream 500 false chr3: 1007937-1008436 Vitis vinifera
VIT_203s0038g01460 1.0kb upstream 1.0kb upstream 2617 true chr3: 1005320-1007936 Vitis vinifera
VIT_203s0038g01460 1.0kb upstream 1.0kb upstream 1000 false chr3: 1005320-1006319 Vitis vinifera
VIT_203s0038g01460 1.0kb downstream 1.0kb downstream 2617 true chr3: 1006320-1008936 Vitis vinifera
VIT_203s0038g01460 1.0kb downstream 1.0kb downstream 1000 false chr3: 1007937-1008936 Vitis vinifera
VIT_203s0038g01460 2.0kb upstream 2.0kb upstream 3617 true chr3: 1004320-1007936 Vitis vinifera
VIT_203s0038g01460 2.0kb upstream 2.0kb upstream 2000 false chr3: 1004320-1006319 Vitis vinifera
VIT_203s0038g01460 2.0kb downstream 2.0kb downstream 3617 true chr3: 1006320-1009936 Vitis vinifera
VIT_203s0038g01460 2.0kb downstream 2.0kb downstream 2000 false chr3: 1007937-1009936 Vitis vinifera
VIT_203s0038g01460 5.0kb upstream 5.0kb upstream 6617 true chr3: 1001320-1007936 Vitis vinifera
VIT_203s0038g01460 5.0kb upstream 5.0kb upstream 5000 false chr3: 1001320-1006319 Vitis vinifera
VIT_203s0038g01460 5.0kb downstream 5.0kb downstream 6617 true chr3: 1006320-1012936 Vitis vinifera
VIT_203s0038g01460 5.0kb downstream 5.0kb downstream 5000 false chr3: 1007937-1012936 Vitis vinifera
VIT_203s0038g01460 10.0kb upstream 10.0kb upstream 11617 true chr3: 996320-1007936 Vitis vinifera
VIT_203s0038g01460 10.0kb upstream 10.0kb upstream 10000 false chr3: 996320-1006319 Vitis vinifera
VIT_203s0038g01460 10.0kb downstream 10.0kb downstream 11617 true chr3: 1006320-1017936 Vitis vinifera
VIT_203s0038g01460 10.0kb downstream 10.0kb downstream 10000 false chr3: 1007937-1017936 Vitis vinifera

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063959 5270 Rosid View MSA
123736714 5271 Pentapetalae View MSA
122788702 5272 Eudicot View MSA
122042999 5273 Angiosperm View MSA
121348952 5274 Embryophyte View MSA
123428386 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain