Gene : VIT_203s0038g01040 V. vinifera v2.1
Defline:  (1 of 3) 3.4.24.7 - Interstitial collagenase / Vertebrate collagenase Genomic Order:  75
Name:  ? VIT_203s0038g01040 Secondary Identifier:  ? PAC:38035290
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
VIT_203s0038g01040 0.5kb upstream 0.5kb upstream 1364 true chr3: 847550-848913 Vitis vinifera
VIT_203s0038g01040 0.5kb upstream 0.5kb upstream 500 false chr3: 848414-848913 Vitis vinifera
VIT_203s0038g01040 0.5kb downstream 0.5kb downstream 1364 true chr3: 847050-848413 Vitis vinifera
VIT_203s0038g01040 0.5kb downstream 0.5kb downstream 500 false chr3: 847050-847549 Vitis vinifera
VIT_203s0038g01040 1.0kb upstream 1.0kb upstream 1864 true chr3: 847550-849413 Vitis vinifera
VIT_203s0038g01040 1.0kb upstream 1.0kb upstream 1000 false chr3: 848414-849413 Vitis vinifera
VIT_203s0038g01040 1.0kb downstream 1.0kb downstream 1864 true chr3: 846550-848413 Vitis vinifera
VIT_203s0038g01040 1.0kb downstream 1.0kb downstream 1000 false chr3: 846550-847549 Vitis vinifera
VIT_203s0038g01040 2.0kb upstream 2.0kb upstream 2864 true chr3: 847550-850413 Vitis vinifera
VIT_203s0038g01040 2.0kb upstream 2.0kb upstream 2000 false chr3: 848414-850413 Vitis vinifera
VIT_203s0038g01040 2.0kb downstream 2.0kb downstream 2864 true chr3: 845550-848413 Vitis vinifera
VIT_203s0038g01040 2.0kb downstream 2.0kb downstream 2000 false chr3: 845550-847549 Vitis vinifera
VIT_203s0038g01040 5.0kb upstream 5.0kb upstream 5864 true chr3: 847550-853413 Vitis vinifera
VIT_203s0038g01040 5.0kb upstream 5.0kb upstream 5000 false chr3: 848414-853413 Vitis vinifera
VIT_203s0038g01040 5.0kb downstream 5.0kb downstream 5864 true chr3: 842550-848413 Vitis vinifera
VIT_203s0038g01040 5.0kb downstream 5.0kb downstream 5000 false chr3: 842550-847549 Vitis vinifera
VIT_203s0038g01040 10.0kb upstream 10.0kb upstream 10864 true chr3: 847550-858413 Vitis vinifera
VIT_203s0038g01040 10.0kb upstream 10.0kb upstream 10000 false chr3: 848414-858413 Vitis vinifera
VIT_203s0038g01040 10.0kb downstream 10.0kb downstream 10864 true chr3: 837550-848413 Vitis vinifera
VIT_203s0038g01040 10.0kb downstream 10.0kb downstream 10000 false chr3: 837550-847549 Vitis vinifera

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026255 5273 Angiosperm View MSA
124075488 5270 Rosid View MSA
123750653 5271 Pentapetalae View MSA
122795756 5272 Eudicot View MSA
121350353 5274 Embryophyte View MSA
123381692 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain