Gene : VIT_207s0005g02540 V. vinifera v2.1
Defline:  (1 of 1) PTHR10742:SF294 - PROTOPORPHYRINOGEN OXIDASE 1, CHLOROPLASTIC Genomic Order:  558
Name:  ? VIT_207s0005g02540 Secondary Identifier:  ? PAC:38056533
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Vvinifera CHLOROPHYLL-SYN Vitis vinifera pathologic  
Vvinifera HEME-BIOSYNTHESIS-II Vitis vinifera pathologic  
Vvinifera PWY-5918 Vitis vinifera pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
VIT_207s0005g02540 0.5kb upstream 0.5kb upstream 4702 true chr7: 4880009-4884710 Vitis vinifera
VIT_207s0005g02540 0.5kb upstream 0.5kb upstream 500 false chr7: 4880009-4880508 Vitis vinifera
VIT_207s0005g02540 0.5kb downstream 0.5kb downstream 4702 true chr7: 4880509-4885210 Vitis vinifera
VIT_207s0005g02540 0.5kb downstream 0.5kb downstream 500 false chr7: 4884711-4885210 Vitis vinifera
VIT_207s0005g02540 1.0kb upstream 1.0kb upstream 5202 true chr7: 4879509-4884710 Vitis vinifera
VIT_207s0005g02540 1.0kb upstream 1.0kb upstream 1000 false chr7: 4879509-4880508 Vitis vinifera
VIT_207s0005g02540 1.0kb downstream 1.0kb downstream 5202 true chr7: 4880509-4885710 Vitis vinifera
VIT_207s0005g02540 1.0kb downstream 1.0kb downstream 1000 false chr7: 4884711-4885710 Vitis vinifera
VIT_207s0005g02540 2.0kb upstream 2.0kb upstream 6202 true chr7: 4878509-4884710 Vitis vinifera
VIT_207s0005g02540 2.0kb upstream 2.0kb upstream 2000 false chr7: 4878509-4880508 Vitis vinifera
VIT_207s0005g02540 2.0kb downstream 2.0kb downstream 6202 true chr7: 4880509-4886710 Vitis vinifera
VIT_207s0005g02540 2.0kb downstream 2.0kb downstream 2000 false chr7: 4884711-4886710 Vitis vinifera
VIT_207s0005g02540 5.0kb upstream 5.0kb upstream 9202 true chr7: 4875509-4884710 Vitis vinifera
VIT_207s0005g02540 5.0kb upstream 5.0kb upstream 5000 false chr7: 4875509-4880508 Vitis vinifera
VIT_207s0005g02540 5.0kb downstream 5.0kb downstream 9202 true chr7: 4880509-4889710 Vitis vinifera
VIT_207s0005g02540 5.0kb downstream 5.0kb downstream 5000 false chr7: 4884711-4889710 Vitis vinifera
VIT_207s0005g02540 10.0kb upstream 10.0kb upstream 14202 true chr7: 4870509-4884710 Vitis vinifera
VIT_207s0005g02540 10.0kb upstream 10.0kb upstream 10000 false chr7: 4870509-4880508 Vitis vinifera
VIT_207s0005g02540 10.0kb downstream 10.0kb downstream 14202 true chr7: 4880509-4894710 Vitis vinifera
VIT_207s0005g02540 10.0kb downstream 10.0kb downstream 10000 false chr7: 4884711-4894710 Vitis vinifera

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065931 5270 Rosid View MSA
123747490 5271 Pentapetalae View MSA
122787686 5272 Eudicot View MSA
122041725 5273 Angiosperm View MSA
121347394 5274 Embryophyte View MSA
123424000 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain