Gene : VIT_214s0030g00670 V. vinifera v2.1
Defline:  (1 of 1) PTHR21089//PTHR21089:SF10 - SHIKIMATE DEHYDROGENASE // SUBFAMILY NOT NAMED Genomic Order:  439
Name:  ? VIT_214s0030g00670 Secondary Identifier:  ? PAC:38022487
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Vvinifera ARO-PWY Vitis vinifera pathologic  
Vvinifera PWY-6163 Vitis vinifera pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
VIT_214s0030g00670 0.5kb upstream 0.5kb upstream 9698 true chr14: 4811382-4821079 Vitis vinifera
VIT_214s0030g00670 0.5kb upstream 0.5kb upstream 500 false chr14: 4820580-4821079 Vitis vinifera
VIT_214s0030g00670 0.5kb downstream 0.5kb downstream 9698 true chr14: 4810882-4820579 Vitis vinifera
VIT_214s0030g00670 0.5kb downstream 0.5kb downstream 500 false chr14: 4810882-4811381 Vitis vinifera
VIT_214s0030g00670 1.0kb upstream 1.0kb upstream 10198 true chr14: 4811382-4821579 Vitis vinifera
VIT_214s0030g00670 1.0kb upstream 1.0kb upstream 1000 false chr14: 4820580-4821579 Vitis vinifera
VIT_214s0030g00670 1.0kb downstream 1.0kb downstream 10198 true chr14: 4810382-4820579 Vitis vinifera
VIT_214s0030g00670 1.0kb downstream 1.0kb downstream 1000 false chr14: 4810382-4811381 Vitis vinifera
VIT_214s0030g00670 2.0kb upstream 2.0kb upstream 11198 true chr14: 4811382-4822579 Vitis vinifera
VIT_214s0030g00670 2.0kb upstream 2.0kb upstream 2000 false chr14: 4820580-4822579 Vitis vinifera
VIT_214s0030g00670 2.0kb downstream 2.0kb downstream 11198 true chr14: 4809382-4820579 Vitis vinifera
VIT_214s0030g00670 2.0kb downstream 2.0kb downstream 2000 false chr14: 4809382-4811381 Vitis vinifera
VIT_214s0030g00670 5.0kb upstream 5.0kb upstream 14198 true chr14: 4811382-4825579 Vitis vinifera
VIT_214s0030g00670 5.0kb upstream 5.0kb upstream 5000 false chr14: 4820580-4825579 Vitis vinifera
VIT_214s0030g00670 5.0kb downstream 5.0kb downstream 14198 true chr14: 4806382-4820579 Vitis vinifera
VIT_214s0030g00670 5.0kb downstream 5.0kb downstream 5000 false chr14: 4806382-4811381 Vitis vinifera
VIT_214s0030g00670 10.0kb upstream 10.0kb upstream 19198 true chr14: 4811382-4830579 Vitis vinifera
VIT_214s0030g00670 10.0kb upstream 10.0kb upstream 10000 false chr14: 4820580-4830579 Vitis vinifera
VIT_214s0030g00670 10.0kb downstream 10.0kb downstream 19198 true chr14: 4801382-4820579 Vitis vinifera
VIT_214s0030g00670 10.0kb downstream 10.0kb downstream 10000 false chr14: 4801382-4811381 Vitis vinifera

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791917 5273 Angiosperm View MSA
124070168 5270 Rosid View MSA
123749206 5271 Pentapetalae View MSA
122795293 5272 Eudicot View MSA
121063186 5274 Embryophyte View MSA
123102956 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain