Gene : VIT_201s0010g00480 V. vinifera v2.1
Defline:  (1 of 3) 5.4.99.5 - Chorismate mutase / Hydroxyphenylpyruvate synthase Genomic Order:  1139
Name:  ? VIT_201s0010g00480 Secondary Identifier:  ? PAC:38028725
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Vvinifera PWY-3461 Vitis vinifera pathologic  
Vvinifera PWY-3462 Vitis vinifera pathologic  
Vvinifera PWY-3481 Vitis vinifera pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
VIT_201s0010g00480 0.5kb upstream 0.5kb upstream 14786 true chr1: 15228760-15243545 Vitis vinifera
VIT_201s0010g00480 0.5kb upstream 0.5kb upstream 500 false chr1: 15228760-15229259 Vitis vinifera
VIT_201s0010g00480 0.5kb downstream 0.5kb downstream 14786 true chr1: 15229260-15244045 Vitis vinifera
VIT_201s0010g00480 0.5kb downstream 0.5kb downstream 500 false chr1: 15243546-15244045 Vitis vinifera
VIT_201s0010g00480 1.0kb upstream 1.0kb upstream 15286 true chr1: 15228260-15243545 Vitis vinifera
VIT_201s0010g00480 1.0kb upstream 1.0kb upstream 1000 false chr1: 15228260-15229259 Vitis vinifera
VIT_201s0010g00480 1.0kb downstream 1.0kb downstream 15286 true chr1: 15229260-15244545 Vitis vinifera
VIT_201s0010g00480 1.0kb downstream 1.0kb downstream 1000 false chr1: 15243546-15244545 Vitis vinifera
VIT_201s0010g00480 2.0kb upstream 2.0kb upstream 16286 true chr1: 15227260-15243545 Vitis vinifera
VIT_201s0010g00480 2.0kb upstream 2.0kb upstream 2000 false chr1: 15227260-15229259 Vitis vinifera
VIT_201s0010g00480 2.0kb downstream 2.0kb downstream 16286 true chr1: 15229260-15245545 Vitis vinifera
VIT_201s0010g00480 2.0kb downstream 2.0kb downstream 2000 false chr1: 15243546-15245545 Vitis vinifera
VIT_201s0010g00480 5.0kb upstream 5.0kb upstream 19286 true chr1: 15224260-15243545 Vitis vinifera
VIT_201s0010g00480 5.0kb upstream 5.0kb upstream 5000 false chr1: 15224260-15229259 Vitis vinifera
VIT_201s0010g00480 5.0kb downstream 5.0kb downstream 19286 true chr1: 15229260-15248545 Vitis vinifera
VIT_201s0010g00480 5.0kb downstream 5.0kb downstream 5000 false chr1: 15243546-15248545 Vitis vinifera
VIT_201s0010g00480 10.0kb upstream 10.0kb upstream 24286 true chr1: 15219260-15243545 Vitis vinifera
VIT_201s0010g00480 10.0kb upstream 10.0kb upstream 10000 false chr1: 15219260-15229259 Vitis vinifera
VIT_201s0010g00480 10.0kb downstream 10.0kb downstream 24286 true chr1: 15229260-15253545 Vitis vinifera
VIT_201s0010g00480 10.0kb downstream 10.0kb downstream 10000 false chr1: 15243546-15253545 Vitis vinifera

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041201 5273 Angiosperm View MSA
124071158 5270 Rosid View MSA
123736644 5271 Pentapetalae View MSA
122792454 5272 Eudicot View MSA
121347234 5274 Embryophyte View MSA
123427559 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain