Gene : VIT_208s0056g01270 V. vinifera v2.1
Defline:  (1 of 1) PTHR31412//PTHR31412:SF0 - FAMILY NOT NAMED // ZINC METALLOPROTEASE EGY1, CHLOROPLASTIC-RELATED Genomic Order:  108
Name:  ? VIT_208s0056g01270 Secondary Identifier:  ? PAC:38024933
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
VIT_208s0056g01270 0.5kb upstream 0.5kb upstream 9326 true chr8: 2001030-2010355 Vitis vinifera
VIT_208s0056g01270 0.5kb upstream 0.5kb upstream 500 false chr8: 2001030-2001529 Vitis vinifera
VIT_208s0056g01270 0.5kb downstream 0.5kb downstream 9326 true chr8: 2001530-2010855 Vitis vinifera
VIT_208s0056g01270 0.5kb downstream 0.5kb downstream 500 false chr8: 2010356-2010855 Vitis vinifera
VIT_208s0056g01270 1.0kb upstream 1.0kb upstream 9826 true chr8: 2000530-2010355 Vitis vinifera
VIT_208s0056g01270 1.0kb upstream 1.0kb upstream 1000 false chr8: 2000530-2001529 Vitis vinifera
VIT_208s0056g01270 1.0kb downstream 1.0kb downstream 9826 true chr8: 2001530-2011355 Vitis vinifera
VIT_208s0056g01270 1.0kb downstream 1.0kb downstream 1000 false chr8: 2010356-2011355 Vitis vinifera
VIT_208s0056g01270 2.0kb upstream 2.0kb upstream 10826 true chr8: 1999530-2010355 Vitis vinifera
VIT_208s0056g01270 2.0kb upstream 2.0kb upstream 2000 false chr8: 1999530-2001529 Vitis vinifera
VIT_208s0056g01270 2.0kb downstream 2.0kb downstream 10826 true chr8: 2001530-2012355 Vitis vinifera
VIT_208s0056g01270 2.0kb downstream 2.0kb downstream 2000 false chr8: 2010356-2012355 Vitis vinifera
VIT_208s0056g01270 5.0kb upstream 5.0kb upstream 13826 true chr8: 1996530-2010355 Vitis vinifera
VIT_208s0056g01270 5.0kb upstream 5.0kb upstream 5000 false chr8: 1996530-2001529 Vitis vinifera
VIT_208s0056g01270 5.0kb downstream 5.0kb downstream 13826 true chr8: 2001530-2015355 Vitis vinifera
VIT_208s0056g01270 5.0kb downstream 5.0kb downstream 5000 false chr8: 2010356-2015355 Vitis vinifera
VIT_208s0056g01270 10.0kb upstream 10.0kb upstream 18826 true chr8: 1991530-2010355 Vitis vinifera
VIT_208s0056g01270 10.0kb upstream 10.0kb upstream 10000 false chr8: 1991530-2001529 Vitis vinifera
VIT_208s0056g01270 10.0kb downstream 10.0kb downstream 18826 true chr8: 2001530-2020355 Vitis vinifera
VIT_208s0056g01270 10.0kb downstream 10.0kb downstream 10000 false chr8: 2010356-2020355 Vitis vinifera

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065213 5270 Rosid View MSA
123737712 5271 Pentapetalae View MSA
122791466 5272 Eudicot View MSA
122047981 5273 Angiosperm View MSA
121344636 5274 Embryophyte View MSA
123425233 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain