Gene : VIT_213s0156g00270 V. vinifera v2.1

Defline:  (1 of 1) PTHR37173:SF1 - HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN Genomic Order:  1518
Name:  ? VIT_213s0156g00270 Secondary Identifier:  ? PAC:38053270

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
VIT_213s0156g00270 0.5kb upstream 0.5kb upstream 15306 true chr13: 24033028-24048333 Vitis vinifera
VIT_213s0156g00270 0.5kb upstream 0.5kb upstream 500 false chr13: 24047834-24048333 Vitis vinifera
VIT_213s0156g00270 0.5kb downstream 0.5kb downstream 15306 true chr13: 24032528-24047833 Vitis vinifera
VIT_213s0156g00270 0.5kb downstream 0.5kb downstream 500 false chr13: 24032528-24033027 Vitis vinifera
VIT_213s0156g00270 1.0kb upstream 1.0kb upstream 15806 true chr13: 24033028-24048833 Vitis vinifera
VIT_213s0156g00270 1.0kb upstream 1.0kb upstream 1000 false chr13: 24047834-24048833 Vitis vinifera
VIT_213s0156g00270 1.0kb downstream 1.0kb downstream 15806 true chr13: 24032028-24047833 Vitis vinifera
VIT_213s0156g00270 1.0kb downstream 1.0kb downstream 1000 false chr13: 24032028-24033027 Vitis vinifera
VIT_213s0156g00270 2.0kb upstream 2.0kb upstream 16806 true chr13: 24033028-24049833 Vitis vinifera
VIT_213s0156g00270 2.0kb upstream 2.0kb upstream 2000 false chr13: 24047834-24049833 Vitis vinifera
VIT_213s0156g00270 2.0kb downstream 2.0kb downstream 16806 true chr13: 24031028-24047833 Vitis vinifera
VIT_213s0156g00270 2.0kb downstream 2.0kb downstream 2000 false chr13: 24031028-24033027 Vitis vinifera
VIT_213s0156g00270 5.0kb upstream 5.0kb upstream 19806 true chr13: 24033028-24052833 Vitis vinifera
VIT_213s0156g00270 5.0kb upstream 5.0kb upstream 5000 false chr13: 24047834-24052833 Vitis vinifera
VIT_213s0156g00270 5.0kb downstream 5.0kb downstream 19806 true chr13: 24028028-24047833 Vitis vinifera
VIT_213s0156g00270 5.0kb downstream 5.0kb downstream 5000 false chr13: 24028028-24033027 Vitis vinifera
VIT_213s0156g00270 10.0kb upstream 10.0kb upstream 24806 true chr13: 24033028-24057833 Vitis vinifera
VIT_213s0156g00270 10.0kb upstream 10.0kb upstream 10000 false chr13: 24047834-24057833 Vitis vinifera
VIT_213s0156g00270 10.0kb downstream 10.0kb downstream 24806 true chr13: 24023028-24047833 Vitis vinifera
VIT_213s0156g00270 10.0kb downstream 10.0kb downstream 10000 false chr13: 24023028-24033027 Vitis vinifera

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065426 5270 Rosid View MSA
123746195 5271 Pentapetalae View MSA
122787235 5272 Eudicot View MSA
122045095 5273 Angiosperm View MSA
121345714 5274 Embryophyte View MSA
123425917 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain